Cite the latest
BacDive paper
×

Rate our new design

Thank you!
BacDive ID 11421
Type strain
Strain Designation B4, NRS-818
NCBI tax ID(s) 45462
Links
version 10 (current version)

General

@ref: 2604

BacDive-ID: 11421

DSM-Number: 6347

keywords: genome sequence, 16S sequence, aerobe, spore-forming, mesophilic, Gram-positive, motile

description: Brevibacillus borstelensis B4 is an aerobe, spore-forming, mesophilic prokaryote of the family Paenibacillaceae.

NCBI tax id

  • NCBI tax id: 45462
  • Matching level: species

strain history

@refhistory
2604<- NRRL; NRS 818 <- J.R. Porter, Univ. of Iowa, 1940, (Bacillus borstelensis) B4, thermophilic strain <- G. Bredemann
67770O. Shida <-- NRRL NRS-818 <-- N. R. Smith <-- J. R. Porter B4.
116899CIP <- 1995, O. Shida, Higeta Shoyu Lab., Chiba, Japan: strain NRS-818 <- NRRL <- J.R. Porter

doi: 10.13145/bacdive11421.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/bacillati
  • keyword: phylum/bacillota
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Brevibacillus
  • species: Brevibacillus borstelensis
  • full scientific name: Brevibacillus borstelensis (Shida et al. 1995 ex Porter 1940) Shida et al. 1996
  • synonyms

    • @ref: 20215
    • synonym: Bacillus borstelensis

@ref: 2604

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Brevibacillus

species: Brevibacillus borstelensis

full scientific name: Brevibacillus borstelensis (Shida et al. 1995) Shida et al. 1996

strain designation: B4, NRS-818

type strain: yes

Morphology

cell morphology

  • @ref: 116899
  • gram stain: positive
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
2604NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
39035MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
116899CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperature
2604positivegrowth30
39035positivegrowth30
59095positivegrowth37
67770positivegrowth30
116899positivegrowth30-45
116899negativegrowth10
116899negativegrowth55

culture pH

  • @ref: 116899
  • ability: positive
  • type: growth
  • pH: 6

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
59095aerobe
116899obligate aerobe

spore formation

  • @ref: 116899
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
116899NaClpositivegrowth0 %
116899NaClnogrowth2 %
116899NaClnogrowth4 %
116899NaClnogrowth6 %
116899NaClnogrowth8 %
116899NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
11689917632nitrate+reduction
11689916301nitrite-reduction
11689917632nitrate-respiration
68371Potassium 5-ketogluconate-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837112936D-galactose-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose-builds acid from
6837117992sucrose-builds acid from
6837128053melibiose-builds acid from
6837117716lactose-builds acid from
6837117306maltose-builds acid from
6837117057cellobiose-builds acid from
6837117814salicin-builds acid from
683714853esculin-builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol-builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose-builds acid from
6837115824D-fructose-builds acid from
6837117634D-glucose-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from
6836830849L-arabinose-fermentation
6836827613amygdalin-fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol-fermentation
6836817634D-glucose-fermentation
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
11689935581indoleno
6836815688acetoinyes
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-testindole test
11689915688acetoin-
11689917234glucose-
6836815688acetoin+
6836835581indole-

enzymes

@refvalueactivityec
116899oxidase-
116899alcohol dehydrogenase-1.1.1.1
116899gelatinase+
116899amylase-
116899DNase+
116899caseinase+3.4.21.50
116899catalase+1.11.1.6
116899tween esterase-
116899lecithinase-
116899lysine decarboxylase-4.1.1.18
116899ornithine decarboxylase-4.1.1.17
116899urease-3.5.1.5
68368cytochrome oxidase+1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase-3.2.1.23

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59095C14:0 ISO11.813.618
    59095C15:0 ANTEISO28.714.711
    59095C15:0 ISO39.414.621
    59095C16:0 iso6.815.626
    59095C16:1 ω11c2.315.757
    59095C16:1 ω7c alcohol6.415.386
    59095C17:1 ISO I/C16:0 DMA116.481
    59095C17:1 ω10c ISO3.616.387
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
59095---------+----------+

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
59095--------------------------------------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
116899-+-----------------+-----------------------------+++----+---+------------------++-+-----+-+++++----

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
39035BorstelGermanyDEUEurope
59095BorstelGermanyDEUEuropeSoil
67770BorstelGermanyDEUEuropeSoil
116899BorstelGermanyDEUEuropeEnvironment, Soil

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_3923.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_95;96_577;97_2409;98_2979;99_3923&stattab=map
  • Last taxonomy: Brevibacillus borstelensis subclade
  • 16S sequence: AB680943
  • Sequence Identity:
  • Total samples: 5049
  • soil counts: 2107
  • aquatic counts: 611
  • animal counts: 965
  • plant counts: 1366

Interaction and safety

risk assessment

@refbiosafety levelbiosafety level comment
26041Risk group (German classification)
1168991Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionassembly levelINSDC accessionBV-BRC accessionNCBI tax IDscoreIMG accession
67770ASM654016v1 assembly for Brevibacillus borstelensis NBRC 15714contigGCA_00654016545462.114546244.75
67770ASM371086v1 assembly for Brevibacillus borstelensis NRRL NRS 818contigGCA_00371086545462.94546251.972854301617
124043ASM5047464v1 assembly for Brevibacillus borstelensis NRS-818contigGCA_0504746454546240.29

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Brevibacillus borstelensis gene for 16S rRNA, partial sequence, strain:DSM 6347TAB1127211486nuccore45462
20218Brevibacillus borstelensis gene for 16S rRNA, partial sequence, strain: NBRC 15714AB6809431461nuccore45462
20218Brevibacillus borstelensis DNA for 16S ribosomal RNAD784561419nuccore45462
124043Brevibacillus borstelensis strain DSM 6347 16S ribosomal RNA gene, partial sequence.MG645261840nuccore45462
124043Brevibacillus borstelensis strain NBRC 15714 16S ribosomal RNA gene, partial sequence.MG645267802nuccore45462
124043Brevibacillus borstelensis strain NRRL NRS- 818(T) 16S ribosomal RNA gene, partial sequence.MK8784231294nuccore45462

GC content

@refGC-contentmethod
260452.4
6777051.3high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

@refmodeltraitdescriptionpredictionconfidencetraining_data
125438gram-positivegram-positivePositive reaction to Gram-stainingyes54.716no
125438anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no94.549no
125438spore-formingspore-formingAbility to form endo- or exosporesyes86.733no
125438aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)yes71.076yes
125438thermophilethermophilicAbility to grow at temperatures above or equal to 45°Cno85.418no
125438motile2+flagellatedAbility to perform flagellated movementyes82.407no
125439BacteriaNetspore_formationAbility to form endo- or exosporesyes88.8
125439BacteriaNetmotilityAbility to perform movementyes85.5
125439BacteriaNetgram_stainReaction to gram-stainingvariable88.5
125439BacteriaNetoxygen_toleranceOxygenic conditions needed for growthaerobe84.5

Literature

@ref: 2604

culture collection no.: DSM 6347, ATCC 51668, CIP 104545, IFO 15714, JCM 9022, NBRC 15714, CCUG 51058, NRRL NRS-818, LMG 16009, NRS 818, CGMCC 1.3102

straininfo link

  • @ref: 126262
  • straininfo: 8287

literature

titleauthorsjournalyearmeshDOItopicPubmed-IDtopic2
Bacterial and fungal communities and their predictive functional profiles in kinema, a naturally fermented soybean food of India, Nepal and BhutanKharnaior P, Tamang JP.Food Res Int2022
Shotgun metagenomics of Cheonggukjang, a fermented soybean food of Korea: Community structure, predictive functionalities and amino acids profileTamang JP, Das S, Kharnaior P, Pariyar P, Thapa N, Jo SW, Yim EJ, Shin DH.Food Res Int2022
Lactic acid bacteria isolated from fermented flour of finger millet, its probiotic attributes and bioactive propertiesDivisekera DMWD, Samarasekera JKRR, Hettiarachchi C, Gooneratne J, Choudhary MI, Gopalakrishnan S, Wahab At.Ann Microbiol2019
Biochemical characterization and bacterial diversity of Agrocybe aegerita during postharvest storageYang C, Yang J, Zhou Y, Ou Y, Wang Z, Qi W, Huang R, Chai S, Yang H, Zhou Y, Liu S.Front Microbiol2025Correlation analysis, Serratia, antioxidant enzyme activities, Wgcna, Relative Abundance Of Bacteria
Purification and characterization of an alkaline pectin lyase produced by a newly isolated Brevibacillus borstelensis (P35) and its applications in fruit juice and oil extractionDemir N, Nadaroglu H, Demir Y, Isik C, Taskin E, Adiguzel A, Gulluce M.Eur Food Res Technol201410.1007/s00217-014-2198-8
Biodegradation efficacy of soil inherent novel sp. Bacillus tropicus (MK318648) onto low density polyethylene matrixSamanta S, Datta D, Halder G.Journal of Polymer Research2020Isolation, Microbial degradation, LDPE, Weight Reduction, Bacillus TropicusPhylogeny
Characterization of a thermostable D-stereospecific alanine amidase from Brevibacillus borstelensis BCS-1.Baek DH, Kwon SJ, Hong SP, Kwak MS, Lee MH, Song JJ, Lee SG, Yoon KH, Sung MH.Appl Environ Microbiol2003enzymology, Amidohydrolases, metabolism, Stereoisomerism, Hot Temperature10.1128/aem.69.2.980-986.2003Enzymology12571020Metabolism
Characteristics of a new enantioselective thermostable dipeptidase from Brevibacillus borstelensis BCS-1 and its application to synthesis of a D-amino-acid-containing dipeptide.Baek DH, Song JJ, Kwon SJ, Park C, Jung CM, Sung MH.Appl Environ Microbiol2004enzymology, metabolism10.1128/aem.70.3.1570-1575.2004Enzymology15006780Metabolism
Isolation, characterization, and identification of bacterial contaminants in semifinal gelatin extracts.De Clerck E, Vanhoutte T, Hebb T, Geerinck J, Devos J, De Vos P.Appl Environ Microbiol2004classification, isolation & purification, classification, isolation & purification, Gelatin10.1128/aem.70.6.3664-3672.2004Phylogeny15184171Enzymology
Molecular characterisation of bacterial contamination in semi-final gelatine extracts, using denaturing gradient gel electrophoresis.de Clerck E, Devos J, de Vos P.Syst Appl Microbiol2004classification, isolation & purification, Gelatin10.1078/0723202041748217Phylogeny15490563Enzymology
Characterization of ichthyocidal activity of Pfiesteria piscicida: dependence on the dinospore cell density.Drgon T, Saito K, Gillevet PM, Sikaroodi M, Whitaker B, Krupatkina DN, Argemi F, Vasta GR.Appl Environ Microbiol2005parasitology, pathogenicity, physiology, parasitology, parasitology10.1128/aem.71.1.519-529.200515640229
Incidence and diversity of potentially highly heat-resistant spores isolated at dairy farms.Scheldeman P, Pil A, Herman L, De Vos P, Heyndrickx M.Appl Environ Microbiol2005microbiology, isolation & purification, isolation & purification, Dairying10.1128/aem.71.3.1480-1494.2005Enzymology15746351Phylogeny
Biodegradation of polyethylene by the thermophilic bacterium Brevibacillus borstelensis.Hadad D, Geresh S, Sivan A.J Appl Microbiol2005physiology, Polyethylene, Environmental Microbiology10.1111/j.1365-2672.2005.02553.x15836478
Cadmium ion biosorption by the thermophilic bacteria Geobacillus stearothermophilus and G. thermocatenulatus.Hetzer A, Daughney CJ, Morgan HW.Appl Environ Microbiol2006growth & development, metabolism10.1128/aem.00295-06Metabolism16751511
Brevibacillus ginsengisoli sp. nov., a denitrifying bacterium isolated from soil of a ginseng field.Baek SH, Im WT, Oh HW, Lee JS, Oh HM, Lee ST.Int J Syst Evol Microbiol2006classification, isolation & purification, Panax, Soil Microbiology10.1099/ijs.0.64382-0Phylogeny17082408Enzymology
Coexistence of antibiotic-producing and antibiotic-sensitive bacteria in biofilms is mediated by resistant bacteria.Narisawa N, Haruta S, Arai H, Ishii M, Igarashi Y.Appl Environ Microbiol2008classification, drug effects, growth & development, biosynthesis, pharmacology, Drug Resistance, Bacterial10.1128/aem.02497-07Phylogeny18441106Pathogenicity
Speciation of Gram-positive bacteria in fresh and ambient-stored sub-tropical marine fish.Al Bulushi IM, Poole SE, Barlow R, Deeth HC, Dykes GA.Int J Food Microbiol2010microbiology, classification, analysis, methods, microbiology10.1016/j.ijfoodmicro.2009.11.021Phylogeny20110133
Product-induced gene expression, a product-responsive reporter assay used to screen metagenomic libraries for enzyme-encoding genes.Uchiyama T, Miyazaki K.Appl Environ Microbiol2010genetics, genetics, methods, Genomic Library, methods10.1128/aem.00464-1020833789
Biodegradation of low-density polyethylene (LDPE) by mixed culture of Lysinibacillus xylanilyticus and Aspergillus niger in soil.Esmaeili A, Pourbabaee AA, Alikhani HA, Shabani F, Esmaeili E.PLoS One2013metabolism, metabolism, metabolism, Soil Microbiology, Biodegradation, Environmental10.1371/journal.pone.0071720Metabolism24086254
Starter culture selection for making Chinese sesame-flavored liquor based on microbial metabolic activity in mixed-culture fermentation.Wu Q, Ling J, Xu Y.Appl Environ Microbiol2014chemistry, Food Microbiology, Fermentation, microbiology10.1128/aem.00905-14Biotechnology24814798
Omics-based interpretation of synergism in a soil-derived cellulose-degrading microbial community.Zhou Y, Pope PB, Li S, Wen B, Tan F, Cheng S, Chen J, Yang J, Liu F, Lei X, Su Q, Zhou C, Zhao J, Dong X, Jin T, Zhou X, Yang S, Zhang G, Yang H, Wang J, Yang R, Eijsink VG, Wang J.Sci Rep2014metabolism, methods, methods, Soil Microbiology, Microbial Consortia10.1038/srep05288Metabolism24924356
Survey of the transcriptome of Brevibacillus borstelensis exposed to low temperature shock.Tripathy S, Sen R, Padhi SK, Sahu DK, Nandi S, Mohanty S, Maiti NK.Gene2014Low temperature, Thermophile, Transcriptome, Brevibacillus Borstelensis, Cold Temperature, genetics, genetics10.1016/j.gene.2014.08.030Transcriptome25151307
Characterization of Bacteriocin like inhibitory substance produced by a new Strain Brevibacillus borstelensis AG1 Isolated from 'Marcha'.Sharma N, Gupta A, Gautam N.Braz J Microbiol2014Preservation, Purification, Bacteriocin, SDS -PAGE, Marcha, drug effects, isolation & purification, pharmacology, isolation & purification, metabolism10.1590/s1517-83822014000300033Enzymology25477937Pathogenicity
Efficient bio-deodorization of thioanisole by a novel bacterium Brevibacillus borstelensis GIGAN1 immobilized onto different parking materials in twin biotrickling filter.Li G, Liang Z, An T, Zhang Z, Chen X.Bioresour Technol2015Biotrickling filter, Odor Control, Brevibacillus Borstelensis, Thioanisole, metabolism, instrumentation, genetics, metabolism10.1016/j.biortech.2015.01.120Metabolism25682227
Community of thermoacidophilic and arsenic resistant microorganisms isolated from a deep profile of mine heaps.Casas-Flores S, Gomez-Rodriguez EY, Garcia-Meza JV.AMB Express201510.1186/s13568-015-0132-526283066
Microbial enhanced heavy crude oil recovery through biodegradation using bacterial isolates from an Omani oil field.Al-Sayegh A, Al-Wahaibi Y, Al-Bahry S, Elshafie A, Al-Bemani A, Joshi S.Microb Cell Fact2015metabolism, metabolism, microbiology10.1186/s12934-015-0330-5Metabolism26377922
Bioremediation of Carbendazim, a Benzimidazole Fungicide Using Brevibacillus borstelensis and Streptomyces albogriseolus Together.Arya R, Sharma AK.Curr Pharm Biotechnol2015metabolism, metabolism, metabolism, metabolism, metabolism10.2174/1389201016666150930115737Metabolism26420048
Profiling of Brevibacillus borstelensis transcriptome exposed to high temperature shock.Tripathy S, Padhi SK, Sen R, Mohanty S, Samanta M, Maiti NK.Genomics2016Heat shock, RT-PCR, Gene expression profile, B. Borstelensis, Heat-Shock Response, genetics, Transcriptome10.1016/j.ygeno.2015.11.005Transcriptome26585522
Draft Genome Sequence of Brevibacillus borstelensis cifa_chp40, a Thermophilic Strain Having Biotechnological Importance.Tripathy S, Padhi SK, Sen R, Maji U, Samanta M, Mohanty S, Maiti NK.J Genomics2016Enzyme Production, Brevibacillus Borstelensis, Hot Water Spring, Draft Genome.10.7150/jgen.14036Genetics26958091
[Screening and Enzyme Production Characteristics of Thermophilic Cellulase-producing Strains].Feng HM, Qin YS, Li XF, Zhou JX, Peng XW.Huan Jing Ke Xue2016enzymology, metabolism, metabolism, Industrial Microbiology, PhylogenyMetabolism27548981Enzymology
Identification and Characterization of Early Mission Phase Microorganisms Residing on the Mars Science Laboratory and Assessment of Their Potential to Survive Mars-like Conditions.Smith SA, Benardini JN, Anderl D, Ford M, Wear E, Schrader M, Schubert W, DeVeaux L, Paszczynski A, Childers SE.Astrobiology2017metabolism, Extraterrestrial Environment, Mars, Spacecraft, Laboratories, Microbial Viability10.1089/ast.2015.1417Metabolism28282220
Brevibacillus borstelensis and Streptomyces albogriseolus have roles to play in degradation of herbicide, sulfosulfuron.Arya R, Mishra NK, Sharma AK.3 Biotech2016Metabolites, Degradation, Sulfosulfuron, Brevibacillus Borstelensis, Streptomyces Albogriseolus10.1007/s13205-016-0562-z28330318
Biodegradation of food waste using microbial cultures producing thermostable alpha-amylase and cellulase under different pH and temperature.Awasthi MK, Wong JWC, Kumar S, Awasthi SK, Wang Q, Wang M, Ren X, Zhao J, Chen H, Zhang Z.Bioresour Technol2018Degradation, Enzyme activities, cell density, Bacterial Consortium, Food Wastes, Bacillus, Cellulase, alpha-Amylases10.1016/j.biortech.2017.06.16028709882
Calcium (II) - and dipicolinic acid mediated-biostimulation of oil-bioremediation under multiple stresses by heat, oil and heavy metals.Radwan SS, Al-Mailem DM, Kansour MK.Sci Rep201710.1038/s41598-017-10121-728842661
Analysis of bacterial communities and characterization of antimicrobial strains from cave microbiota.Yasir M.Braz J Microbiol2018Antimicrobial, Caves, Microbiota, Sediments, 16S ribosomal RNA, classification, isolation & purification, Environmental Microbiology, Antibiosis, Biota10.1016/j.bjm.2017.08.005Phylogeny29108974Enzymology
Evaluation of the Role of Novel Aprotic Dimethyl Sulfoxide in Cutaneous Antisepsis Protocols Prior to Blood Donor Phlebotomy with Isopropyl Alcohol, Povidone Iodine or Chlorhexidine.Sachdev S, Sethuraman N, Gautam V, Pahwa D, Kalra A, Sharma RR, Marwaha N, Ray P.Indian J Hematol Blood Transfus2018dimethyl sulfoxide, Isopropyl Alcohol, Povidone Iodine, Chlorhexidine Gluconate10.1007/s12288-017-0816-x29398812
Exploring multi potential uses of marine bacteria; an integrated approach for PHB production, PAHs and polyethylene biodegradation.Mohanrasu K, Premnath N, Siva Prakash G, Sudhakar M, Boobalan T, Arun A.J Photochem Photobiol B2018Marine, Spectroscopy, Biofilm, PAHs, Polyethylene, Polyhydroxybutyrate, metabolism, metabolism, metabolism, metabolism, metabolism10.1016/j.jphotobiol.2018.05.014Metabolism29864727
Isolation and Characteristics of Biotechnologically Important Antagonistic Thermophilic Bacteria from Rhizosphere of Haloxylon salicornicum.Aslam M, Nasim FU, Ruhi R, Murad H, Ejaz S, Choudhary MS, Mustafa G, Ashraf M, Rehman J.Pol J Microbiol2018Rhizobacteria, Haloxylon Salicornicum, 16S Rrna For Phylogenic Analysis, Rhizosphere On Cholistan Desert, classification, microbiology, Soil Microbiology, Antibiosis, Rhizosphere, classification10.5604/01.3001.0011.6142Phylogeny30015424
Immobilization of a Mesophilic Lipase on Graphene Oxide: Stability, Activity, and Reusability Insights.Dutta N, Saha MK.Methods Enzymol2018Biocatalysis, Lipase Immobilization, Graphene Oxide Nanosupport, chemistry, chemistry, Biocatalysis10.1016/bs.mie.2018.05.00930244793
A novel design to screen chlorogenic acid-producing microbial strains from the environment.Wang X, Qin L, Zhou J, Li Y, Fan X.Sci Rep2018metabolism, metabolism, metabolism, isolation & purification, High-Throughput Screening Assays, metabolism, metabolism10.1038/s41598-018-32968-0Metabolism30283150Enzymology
Molecular Characterization of Low-Density Polyethene (LDPE) Degrading Bacteria and Fungi from Dandora Dumpsite, Nairobi, Kenya.Ndahebwa Muhonja C, Magoma G, Imbuga M, Makonde HM.Int J Microbiol201810.1155/2018/416784530631365
Data associated with the characterization and presumptive identification of Bacillus and related species isolated from honey samples by using HiCrome Bacillus agar.Alippi AM.Data Brief2019Bacillus, Honey, Chromogenic media, Paenibacillus, Brevibacillus, Lysinibacillus, Aerobic Spore-forming Bacteria, Hicrome Bacillus Agar, Rummeliibacillus10.1016/j.dib.2019.10420631338401
Seed interior microbiome of rice genotypes indigenous to three agroecosystems of Indo-Burma biodiversity hotspot.Raj G, Shadab M, Deka S, Das M, Baruah J, Bharali R, Talukdar NC.BMC Genomics2019agroecosystem, Upland, Deep-water, Standing Water, Midland, Rice Endophytes, Seed Microbiome, isolation & purification, Microbiota, microbiology10.1186/s12864-019-6334-5Enzymology31795935Phylogeny
Isolation of a novel thermophilic bacterium capable of producing high-yield bioemulsifier and its kinetic modelling aspects along with proposed metabolic pathway.Dhagat S, Jujjavarapu SE, Jujjavarapu SE.Braz J Microbiol2020Bioemulsifier, Thermophiles, Brevibacillus, Kinetic Model Fitting, isolation & purification, metabolism, metabolism, Metabolic Networks and Pathways, Hot Temperature10.1007/s42770-020-00228-xMetabolism31955394Stress
Lipase immobilized on functionalized superparamagnetic few-layer graphene oxide as an efficient nanobiocatalyst for biodiesel production from Chlorella vulgaris bio-oil.Nematian T, Shakeri A, Salehi Z, Saboury AA.Biotechnol Biofuels2020Chlorella vulgaris, Bio-oil, biodiesel, Superparamagnetic, Few-layer Graphene Oxide, Nano-biocatalyst10.1186/s13068-020-01688-x32206090
Biogenic synthesis of silver nanoparticles: Antibacterial and cytotoxic potential.Algebaly AS, Mohammed AE, Abutaha N, Elobeid MM.Saudi J Biol Sci2020Cytotoxicity, Azadirachta indica, Antibacterial, Calligonum Comosum, Caspase 3/7, Agnps10.1016/j.sjbs.2019.12.01432346344
Utilization of methyltrioctylammonium chloride as new ionic liquid in pretreatment of sugarcane bagasse for production of cellulase by novel thermophilic bacteria.Ejaz U, Muhammad S, Hashmi IA, Ali FI, Sohail M.J Biotechnol2020Cellulase, Pretreatment, Alkali, Ionic Liquid, Thermophilic Bacteria, Sugarcane Bagasse, chemistry, metabolism, chemistry, chemistry, Brevibacillus10.1016/j.jbiotec.2020.04.013Metabolism32360575
Characterizing Peri-Implant and Sub-Gingival Microbiota through Culturomics. First Isolation of Some Species in the Oral Cavity. A Pilot Study.Martellacci L, Quaranta G, Fancello G, D'Addona A, Sanguinetti M, Patini R, Masucci L.Pathogens2020Periodontology, Pilot Study, Oral Microbiota, Culturomics, Implant Dentistry10.3390/pathogens905036532397631
Wheat phyllosphere yeasts degrade propiconazole.Kucharska K, Wachowska U, Czaplicki S.BMC Microbiol2020Rhodotorula, Wheat leaves, fungicide, Aureobasidium, metabolism, microbiology, metabolism, metabolism10.1186/s12866-020-01885-6Metabolism32758148
Production of Highly Active Extracellular Amylase and Cellulase From Bacillus subtilis ZIM3 and a Recombinant Strain With a Potential Application in Tobacco Fermentation.Dai J, Dong A, Xiong G, Liu Y, Hossain MS, Liu S, Gao N, Li S, Wang J, Qiu D.Front Microbiol2020Cellulase, Bacillus, Amylase, Tobacco, Heterogeneous expression10.3389/fmicb.2020.0153932793132
Whole-Genome Sequence of Brevibacillus borstelensis SDM, Isolated from a Sorghum-Adapted Microbial Community.Aulitto M, Tom LM, Ceja-Navarro JA, Simmons BA, Singer SW.Microbiol Resour Announc202010.1128/mra.01046-2033239462
Environmental Consortium Containing Pseudomonas and Bacillus Species Synergistically Degrades Polyethylene Terephthalate Plastic.Roberts C, Edwards S, Vague M, Leon-Zayas R, Scheffer H, Chan G, Swartz NA, Mellies JL.mSphere2020Bacillus, Pseudomonas, Pollution, Biodegradation, Bioaugmentation, Consortia, Pet Plastic, metabolism, metabolism, metabolism, metabolism10.1128/msphere.01151-20Metabolism33361127
Bacterial and fungal communities and their predictive functional profiles in kinema, a naturally fermented soybean food of India, Nepal and Bhutan.Kharnaior P, Tamang JP.Food Res Int2021Bacillus, Bacterial community, High-throughput, Fungal Community, Natural Fermentation, Kinema, Predictive Functionality, Mycobiome, Fermented Foods10.1016/j.foodres.2020.11005533648280
Groundwater hydro-geochemistry, quality, microbiology and human health risk assessment in semi-arid area of Rajasthan, India: a chemometric approach.Khan N, Malik A, Nehra KEnviron Monit Assess2021Bacillus, Brevibacillus, Child, Environmental Monitoring, Female, *Groundwater, Humans, India, Male, RNA, Ribosomal, 16S, Risk Assessment, *Water Pollutants, Chemical/analysis, Water Quality10.1007/s10661-021-08979-2Pathogenicity33772669Phylogeny
Green synthesis of bioemulsifier and exopolysaccharides by Brevibacillus borstelensis and process parameters optimization using response surface model, genetic algorithm and NSGA.Dhagat S, Jujjavarapu SE, Jujjavarapu SE.J Environ Manage2021Exopolysaccharides, Bioemulsifier, genetic algorithm, Multiobjective Optimization, Ccd-rsm, Nondominated Sorting Genetic Algorithm, Algorithms, Models, Genetic10.1016/j.jenvman.2021.11266733934022
Effect of liquid volume and microflora source on degradation rate and microbial community in corn stover degradation.Wang J, Zhu D, Zhao S, Xu S, Yang R, Zhao W, Zhang X, Huang Z.AMB Express2021Cellulase, Dissolved oxygen, Microbial diversity, Microbial Consortia, Corn Stover Degradation10.1186/s13568-021-01233-534061258
A Review of the Effects and Production of Spore-Forming Probiotics for Poultry.Popov IV, Algburi A, Prazdnova EV, Mazanko MS, Elisashvili V, Bren AB, Chistyakov VA, Tkacheva EV, Trukhachev VI, Donnik IM, Ivanov YA, Rudoy D, Ermakov AM, Weeks RM, Chikindas ML.Animals (Basel)2021Poultry, Bacillus, Antibiotics, Solid-state fermentation, Growth performance, Spore-forming Probiotics10.3390/ani1107194134209794
Comparative Investigation of 15 Xenobiotic-Metabolizing N-Acetyltransferase (NAT) Homologs from Bacteria.Garefalaki V, Papavergi MG, Savvidou O, Papanikolaou G, Felfoldi T, Marialigeti K, Fakis G, Boukouvala S.Appl Environ Microbiol2021Bacillus, Bacteria, Eubacteria, Actinobacteria, Acyl coenzyme A, comparative analysis, Arylamine, Xenobiotic, Functional Divergence, Xenobiotic Compounds, Pollutant Detoxification, N-Acetyltransferase (Nat), Acetyltransferases, Bacterial Proteins10.1128/aem.00819-2134288706
Biofilm mediated decolorization and degradation of reactive red 170 dye by the bacterial consortium isolated from the dyeing industry wastewater sediments.Barathi S, Aruljothi KN, Karthik C, Padikasan IA, Ashokkumar V.Chemosphere2022Degradation, Biofilm, Consortium, Allium Cepa., Decoloriation, Reactive Dye 170, Coloring Agents, Brevibacillus10.1016/j.chemosphere.2021.13191434418664
Thermo-resistant enzyme-producing microorganisms isolated from composting.Cotta SPM, Marins MS, Marriel IE, Lana UGP, Gomes EA, Figueiredo JEF, Oliveira-Paiva CA.Braz J Biol2021Composting10.1590/1519-6984.24420534468511
Wild Halophytic Phragmites karka Biomass Saccharification by Bacterial Enzyme Cocktail.Ansari I, Ejaz U, Abideen Z, Gulzar S, Syed MN, Liu J, Li W, Fu P, Sohail M.Front Microbiol2021Biomass, Central composite design, Saccharification, Enzyme Cocktail, Phragmites Karka10.3389/fmicb.2021.71494034616380
Plant growth-promoting abilities and community structure of culturable endophytic bacteria from the fruit of an invasive plant Xanthium italicum.Han C, Kuchkarova N, Zhou S, Zhang C, Shi K, Zou T, Shao H.3 Biotech2021Diversity, Community structure, Endophytes, Xanthium Italicum, Heteromorphism Seed10.1007/s13205-021-02997-034631350
Biodegradation of Different Types of Plastics by Tenebrio molitor Insect.Bulak P, Proc K, Pytlak A, Puszka A, Gawdzik B, Bieganowski A.Polymers (Basel)2021Bioremediation, Waste Management, Mealworm, Entomoremediation10.3390/polym1320350834685267
Production of Thermo-Alkali-Stable Xylanase from Bacillus licheniformis Isolated from Natural Hot Water Geyser.Malhotra G, Chapadgaonkar SS.J Microsc Ultrastruct2021Bacillus, Xylanase, Paper, Lignocellulosic Biomass, Industrial Enzymes, Thermostable Enzymes10.4103/jmau.jmau_21_20Enzymology34729354Biotechnology
Brevibacillus composti sp. nov., isolated from hyperthermophilic compost.Tang R, Zhang Q, Ye Y, Yang S, Fu T, Liu GH, Zhou SGInt J Syst Evol Microbiol2021Bacterial Typing Techniques, Base Composition, *Brevibacillus/classification/isolation & purification, China, *Composting, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry10.1099/ijsem.0.005098Phylogeny34762578Transcriptome
First report of Serratia marcescens associated with black rot of Citrus sinensis fruit , and evaluation of its biological control measures in Bangladesh.Hasan MF, Islam MA, Sikdar B.F1000Res2020Biological control, Orange, 16S rRNA gene, Black rot, Serratia marcescens, Citrus, Citrus sinensis10.12688/f1000research.27657.2Phylogeny34804504
Screening and identification of cellulose-degrading bacteria from soil and leaves at Kerman province, Iran.Khosravi F, Khaleghi M, Naghavi H.Arch Microbiol2021Soil, Cellulose, Leaves, Cellulolytic Bacteria, Brevibacillus Borstelensis, Cellulose, Cellulase10.1007/s00203-021-02713-934961888
Shotgun metagenomics of Cheonggukjang, a fermented soybean food of Korea: Community structure, predictive functionalities and amino acids profile.Tamang JP, Das S, Kharnaior P, Pariyar P, Thapa N, Jo SW, Yim EJ, Shin DH.Food Res Int2022Microbial community, Shotgun sequencing, Cheonggukjang, Amino Acid Profiles, Predictive Functionality, Metagenomics, Fermented Foods10.1016/j.foodres.2021.110904Genetics34980421
How to Build a Microplastics-Free Environment: Strategies for Microplastics Degradation and Plastics Recycling.Chen J, Wu J, Sherrell PC, Chen J, Wang H, Zhang WX, Yang J.Adv Sci (Weinh)2022Degradation, Recycle, Microplastics, Plastic Waste, Catalytic Conversion10.1002/advs.20210376434989178
Microbial Contamination of Photographic and Cinematographic Materials in Archival Funds in the Czech Republic.Purkrtova S, Savicka D, Kadava J, Sykorova H, Kovacova N, Kalisova D, Nesporova T, Novakova M, Masek Benetkova B, Koukalova L, Boryskova S, Hnulikova B, Durovic M, Demnerova K.Microorganisms2022MALDI-TOF MS, Fungal contamination, Czech Republic, Bacterial Contamination, Microbial Contamination, Cultivation Methods, Archival Funds, Cinematographic Materials, Photographic Materials10.3390/microorganisms1001015535056604
Potential Association Between Changes in Microbiota Level and Lung Diseases: A Meta-Analysis.Chai L, Wang Q, Si C, Gao W, Zhang L.Front Med (Lausanne)2021Asthma, Meta-analysis, COPD, Lung Microbiota10.3389/fmed.2021.72363535096850
Microbiological Characteristics of Some Stations of Moscow Subway.Pochtovyi AA, Vasina DV, Verdiev BI, Shchetinin AM, Yuzhakov AG, Ovchinnikov RS, Tkachuk AP, Gushchin VA, Gintsburg AL.Biology (Basel)202216S rRNA gene, Aerosol, Surface, Public Health, Microbiome, Subway, Amr10.3390/biology11020170Phylogeny35205037
Optimization and characterization of biosurfactant produced by indigenous Brevibacillus borstelensis isolated from a low permeability reservoir for application in MEOR.Dong H, Zheng A, He Y, Wang X, Li Y, Yu G, Gu Y, Banat IM, Sun S, She Y, Zhang F.RSC Adv202210.1039/d1ra07663a35425221
Deep insights into the gut microbial community of extreme longevity in south Chinese centenarians by ultra-deep metagenomics and large-scale culturomics.Li C, Luan Z, Zhao Y, Chen J, Yang Y, Wang C, Jing Y, Qi S, Li Z, Guo H, Xu W, Zhao B, Wu C, Wang S, Yang Y, Sun G.NPJ Biofilms Microbiomes2022Metagenomics, Microbiota10.1038/s41522-022-00282-3Genetics35440640
Production, statistical optimization, and functional characterization of alkali stable pectate lyase of Paenibacillus lactis PKC5 for use in juice clarification.Sheladiya P, Kapadia C, Prajapati V, Ali El Enshasy H, Abd Malek R, Marraiki N, Zaghloul NSS, Sayyed RZ.Sci Rep2022Alkalies, Acetone10.1038/s41598-022-11022-035534597
Recycling of plastic wastes generated from COVID-19: A comprehensive illustration of type and properties of plastics with remedial options.Abhilash, Inamdar I.Sci Total Environ2022Plastics, Types, Life Cycle Assessment, Current Methods, Microbial Route, Refuse Disposal, COVID-1910.1016/j.scitotenv.2022.15589535568167
Metagenomic-Metabolomic Mining of Kinema, a Naturally Fermented Soybean Food of the Eastern Himalayas.Kharnaior P, Tamang JP.Front Microbiol2022Metabolomics, Metagenomics, Fermented Soybean, Metataxonomic, Immunodomulators10.3389/fmicb.2022.868383Genetics35572705
Plant organ- and growth stage-diversity of endophytic bacteria with potential as biofertilisers isolated from wheat (Triticum aestivum L.).Pang F, Tao A, Ayra-Pardo C, Wang T, Yu Z, Huang S.BMC Plant Biol2022Plant-growth-promoting Bacteria, Crop Nutrition, Pot Trial, Triticum, Plant Roots10.1186/s12870-022-03615-835659526
Influence of Brevibacillus borestelensis strains on phytoremediation potential and biomolecules contents of Jatropha curcas on diluted chromium sludge soil.Narayanan M, Muthusamy M, Alshiekheid M, Sabour A, Lan Chi NT, Pugazhendhi A.Chemosphere2022Phytoremediation, Jatropha curcas, Brevibacillus Borstelensis Ak2, Brevibacillus Borstelensis Utm105, Cr Sludge Soil, Jatropha, Soil Pollutants, Brevibacillus10.1016/j.chemosphere.2022.13534535738403
Morphological and physiological response of sour orange (Citrus aurantium L.) seedlings to the inoculation of taxonomically characterized bacterial endophytes.Mushtaq S, Shafiq M, Haider MS, Nayik GA, Salmen SH, El Enshasy HA, Kenawy AA, Goksen G, Vazquez-Nunez E, Ansari MJ.Saudi J Biol Sci2022Physiology, 16S rRNA, Sour orange, Inoculation methods, Endophytes, Plant-microbe Interaction10.1016/j.sjbs.2022.01.051Phylogeny35844422
Whole Wheat Bread Enriched with Cricket Powder as an Alternative Protein.Mafu A, Ketnawa S, Phongthai S, Schonlechner R, Rawdkuen S.Foods2022Edible insect, Cricket, Acheta Domesticus, Alternative Protein, Future Food10.3390/foods1114214235885385
Deciphering the genetic and functional diversity of cultivable bacteria from chasmophytic pigweed (Chenopodium album) from Tsomoriri, Ladakh, India.Das S, Verma S, Choudhary P, Singh R, Saxena AK.3 Biotech2022Bacteria, Diversity, Abiotic stress, Microbial diversity, Extremotolerance, plant growth promotion, Chasmophyte10.1007/s13205-022-03278-036032512
Microbiological Quality of Deer Meat Treated with Essential Oil Litsea cubeba.Kunova S, Sendra E, Hascik P, Vukovic NL, Vukic MD, Hsouna AB, Mnif W, Kacaniova M.Animals (Basel)2022Essential oils, MALDI-TOF, Meat Safety, Vacuum-packaging, Deer Meat10.3390/ani1218231536139173
Constructing metagenome-assembled genomes for almost all components in a real bacterial consortium for binning benchmarking.Wu Z, Wang Y, Zeng J, Zhou Y.BMC Genomics2022Abundance, Composition, Metagenomics, Benchmark, Binning, Metagenome10.1186/s12864-022-08967-xGenetics36352370
Effect of nutritional parameters on microbial production of L-Asparaginase by novel Brevibacillus borstelensis ML12.Mukherjee R, Bera D.Prep Biochem Biotechnol2023Bioprocess, Growth kinetics, L-asparaginase, Nutritional Parameters, Asparaginase, Antineoplastic Agents10.1080/10826068.2022.2164592Enzymology36628451
Novel Plant-Associated Brevibacillus and Lysinibacillus Genomospecies Harbor a Rich Biosynthetic Potential of Antimicrobial Compounds.Jahne J, Le Thi TT, Blumenscheit C, Schneider A, Pham TL, Le Thi PT, Blom J, Vater J, Schweder T, Lasch P, Borriss R.Microorganisms2023Taxonomy, Secondary metabolites, Nematicidal activity, Phylogenomics, Genomic islands, plant growth promotion, Average Nucleotide Identity, Ani, Brevibacillus, Lysinibacillus, Dddh, Dna-dna Hybridization: Biocontrol10.3390/microorganisms11010168Genetics36677460
Accelerated biodecolorization and detoxification of synthetic textile dye Acid Maroon V by bacterial consortium under redox mediator system.Patel Y, Gupte A.3 Biotech2023Toxicity, Decolorization, Lawsone, Acid Maroon V, Consortium Edpa10.1007/s13205-023-03466-636685318
Biochemical characterization of extremozyme L-asparaginase from Pseudomonas sp. PCH199 for therapeutics.Darnal S, Patial V, Kumar V, Kumar S, Kumar V, Padwad YS, Singh D, Singh D.AMB Express2023Cytotoxicity, Protein purification, Himalayan Niche, Osmotic Shock Method, Periplasmic L-asparaginase10.1186/s13568-023-01521-2Enzymology36828987
Insights into the degradation of high-density polyethylene microplastics using microbial strains: Effect of process parameters, degradation kinetics and modeling.Hooda S, Annu, Mondal P.Waste Manag2023Kinetic study, Non-linear regression models, Microbial remediation, Microplastics, Biodegradation Process, Water Pollutants, Chemical, Microplastics10.1016/j.wasman.2023.04.00237059038
Characterization of plastic degrading bacteria isolated from sewage wastewater.Ali S, Rehman A, Hussain SZ, Bukhari DA.Saudi J Biol Sci2023Plastic Pollution, Plastic Degradation, Pseudomonas Aeruginosa Sh6b, Pseudomonas Sp. Sh5b10.1016/j.sjbs.2023.10362837064755
Zinc-solubilizing Bacillus spp. in conjunction with chemical fertilizers enhance growth, yield, nutrient content, and zinc biofortification in wheat crop.Yadav RC, Sharma SK, Varma A, Singh UB, Kumar A, Bhupenchandra I, Rai JP, Sharma PK, Singh HV.Front Microbiol2023Rhizosphere, Wheat (Triticum aestivum), Nutrient use efficiency, PGPR, Biological yield, Microbial Inoculants, Zn Biofortification10.3389/fmicb.2023.121093837469421
Marine Microbial Polysaccharides: An Untapped Resource for Biotechnological Applications.Jeewon R, Aullybux AA, Puchooa D, Nazurally N, Alrefaei AF, Zhang Y.Mar Drugs2023Polysaccharides, Microorganisms, Diversity, Marine, Biotechnological Applications, Bacteria, Ecosystem10.3390/md2107042037504951
Enhancing the Antibiotic Production by Thermophilic Bacteria Isolated from Hot Spring Waters via Ethyl Methanesulfonate Mutagenesis.Kortam YG, Abd El-Rahim WM, Khattab AEA, Rebouh NY, Gurina RR, Barakat OS, Zakaria M, Moawad H.Antibiotics (Basel)2023Antimicrobial, Antibiotic-resistant Bacteria, Harsh Environment, Ethyl Methanesulfonate10.3390/antibiotics1207109537508191
Identification of rare microbial colonizers of plastic materials incubated in a coral reef environment.Singleton SL, Davis EW, Arnold HK, Daniels AMY, Brander SM, Parsons RJ, Sharpton TJ, Giovannoni SJ.Front Microbiol2023FTIR, In situ, 16S rDNA, Microbial succession, Microbiome, Him, Polyolefins, Plastisphere10.3389/fmicb.2023.1259014Phylogeny37869676
Toward a zero waste approach: Utilization of sugarcane bagasse for dye removal and multienzymes production.Ejaz U, Taj A, Sohail M, Alanazi AK, Abo-Dief HM.J Basic Microbiol2024Malachite green, Plant Cell Wall Degrading Enzymes, Trametes Pubescens, Brevibacillus Borstelensis, Neobacillus Sedimentimangrovi, Saccharum, Rosaniline Dyes, Cellulase10.1002/jobm.202300529Enzymology38066405
Brevibacillus ruminantium sp. nov., isolated from cow faeces.Kim S, Heo J, Kwon SW, Lee D, Han BH, Hong SB, Kim Y.Int J Syst Evol Microbiol2023Taxonomy, Novel Species, Cow Faeces, Brevibacillus Ruminantium Sp. Nov., Brevibacillus10.1099/ijsem.0.00620438097527
Influence of MHz-order acoustic waves on bacterial suspensions.Chew NSL, Ooi CW, Yeo LY, Tan MK.Ultrasonics2024Bacterial Inactivation, Amplitude Modulation, Surface Acoustic Wave, Plasma-activated Water, Hybrid Modulation, Bacteria, Escherichia coli10.1016/j.ultras.2023.10723438171227
Lignocellulolytic Potential of Microbial Consortia Isolated from a Local Biogas Plant: The Case of Thermostable Xylanases Secreted by Mesophilic Bacteria.Bombardi L, Salini A, Aulitto M, Zuliani L, Andreolli M, Bordoli P, Coltro A, Vitulo N, Zaccone C, Lampis S, Fusco S.Int J Mol Sci2024Microbial diversity, Thermal analysis, Biomass Conversion, Biorefineries, Spent Mushroom Substrate, Carbohydrate-active Enzymes, Microbiomes, Metagenomic Analyses, Microbiome Dynamics, Total Carbohydrate Analysis, Agaricales, Microbiota10.3390/ijms25021090Enzymology38256164
Screening and characterization of thermostable enzyme-producing bacteria from selected hot springs of Ethiopia.Guta M, Abebe G, Bacha K, Cools P.Microbiol Spectr2024Thermophiles, Ethiopia, Thermostable Enzyme, Hot Springs, Enzyme Screening, Cellulases, Hot Springs10.1128/spectrum.03710-2338294247
Screening of cellulose-degrading bacteria and optimization of cellulase production from Bacillus cereus A49 through response surface methodology.Wang J, Bao F, Wei H, Zhang Y.Sci Rep2024Cellulase, Paenibacillus10.1038/s41598-024-58540-738565929
Virulent and Multi-drug-Resistant Edwardsiella tarda Infection in Oscar Fish: Unveiling the Threat of Mass Mortality and AMR Dissemination.Vishnupriya V, Swaminathan TR, Dharmarathnam A, Sharma SRK, Preena PG.Curr Microbiol2024Edwardsiella tarda, Enterobacteriaceae Infections, Fish Diseases, Anti-Bacterial Agents, Microbial Sensitivity Tests, Drug Resistance, Multiple, Bacterial10.1007/s00284-024-03698-638753164
Polyethylene Biodegradation by an Artificial Bacterial Consortium: Rhodococcus as a Competitive Plastisphere Species.Putcha JP, Kitagawa W.Microbes Environ2024Biodegradation, Rhodococcus, Polyethylene, Consortium, Plastisphere, Biofilms, Rhodococcus, Polyethylene, Biodegradation, Environmental, Microbial Consortia10.1264/jsme2.me2403139085141
Microbial landscape of cooked meat products: evaluating quality and safety in vacuum-packaged sausages using culture-dependent and culture-independent methods over 1 year in a sustainable food chain.Lemos Junior WJF, Marques Costa L, Alberto Guerra C, Sales de Oliveira V, Gava Barreto A, Alves de Oliveira F, de Paula BP, Esmerino EA, Corich V, Giacomini A, Guerra AF.Front Microbiol2024Meat, Sustainable production, Cooked Meat, Quality Methods, Sausage Microbiome10.3389/fmicb.2024.145781939328911
Pseudo-outbreak of Bacillaceae species associated with poor compliance with blood culture collection recommendations.Borcan AM, Vasile CC, Popa AI, Badea CA, Popescu GA, Talapan D.Eur J Clin Microbiol Infect Dis2024Bacillaceae, Blood Culture Contamination, Pseudo-outbreak, Bacteriaemia, Medical Cotton Wool, Bacteremia, Disease Outbreaks, Blood Culture10.1007/s10096-024-04925-539331309
Thermophilic Hemicellulases Secreted by Microbial Consortia Selected from an Anaerobic Digester.Bombardi L, Orlando M, Aulitto M, Fusco S.Int J Mol Sci2024Xylanases, phylogenetic analyses, Microbial Consortia, Carbohydrate-active Enzymes, Lignocellulose Biomass, Lignin, Bioreactors, Extremophiles10.3390/ijms25189887Enzymology39337375
Use of thermophilic bacteria to utilize sugarcane bagasse: Efficient cellulase production, saccharification, and hydrolysate applications.Ejaz U, Alorabi M, Imran A, Khan I, Khalique HA, Malik R, Sohail M.Heliyon2024Fermentation, Saccharification, Hydrolysate, Brevibacillus Borstelensis, Neobacillus Sedimentimangrovi10.1016/j.heliyon.2024.e3811439416844
Cast from the Past? Microbial Diversity of a Neolithic Stone Circle.Martin-Cereceda M, de Cos-Gandoy A, Williams RAJ, Elliott D, Serrano-Bellon A, Perez-Uz B, Sanchez-Jimenez A.Microorganisms2024Chlorophyta, Methanogens, Microbiome, Spatial Connectivity, Cyanobacteriota, Pseudomonadota, Arbor Low, Euryarcheota, Neolithic Monument, Nitrogen-oxidizing Archaea10.3390/microorganisms1211233839597728
Efficient extraction and determination of Au(III) ions from acid mine drainage and water samples using silica gel immobilized with Brevibacillus borstelensis.Camoglu AY, Duran C, Ozdes D, Nalcaoglu A, Bektas KI, Belduz AO.Anal Methods202510.1039/d4ay01950d39660577
Evaluation of Quality of Nitrite-Free Fermented Roe Deer (Capreolus capreolus) Sausage with Addition of Ascorbic Acid and Reduced NaCl.Wojciak KM, Keska P, Kacaniova M, Cmikova N, Solska E, Ogorek A.Foods2024Roe deer, Tbars, Microbial Analysis, Fermented Sausage, Venison, Meat Color10.3390/foods1323382339682894
Characterization and bioefficacy of grapevine bacterial endophytes against Colletotrichum gloeosporioides causing anthracnose disease.Holkar SK, Bhanbhane VC, Ghotgalkar PS, Markad HN, Lodha TD, Saha S, Banerjee K.Front Microbiol2024Bacillus subtilis, Biological control, Grapes, Micrococcus luteus, Molecular characterization, endosymbionts, Brevibacillus Borstelensis10.3389/fmicb.2024.150278839736992
Co-consumption for plastics upcycling: A perspective.Weldon M, Ganguly S, Euler C.Metab Eng Commun2025Polyethylene Terephthalate, Plastic Upcycling, Carbon Co-Consumption10.1016/j.mec.2024.e0025339802937
Polyurethane foam degradation combining ozonization and mealworm biodegradation and its exploitation.Ros M, Lidon P, Carrascosa A, Munoz M, Navarro MV, Orts JM, Pascual JA.Environ Sci Pollut Res Int2025Chitin, Frass, 16SrRNA, Ozonization, Gut Microbiome, T. Molitor, Tenebrio, Ozone, Polyurethanes10.1007/s11356-025-36029-8Phylogeny39921778
Cytobacillus sp. Strain HMBC3 from Saudi Arabian Soil Degrades Low-Density Polyethylene.Alamer NJ, Aldayel MF, Khalifa A.J Microbiol Biotechnol2024Soil, Pollution, Biodegradation, Plastic, Saudi Arabia, Cytobacillus, Bacillaceae, Polyethylene, Soil Microbiology10.4014/jmb.2409.0902339947674
Alginate Beads Encapsulated Auxin-Producing PGPR as a Biofertilizer Promotes Triticum aestivum Growth.Mushtaq N, Iqbal A, Batool S, Janiad S, Ahmed M, Al-Asmari F, Rahim MA, Ramadan MF, Zongo E.ACS Omega202510.1021/acsomega.4c0606639959110
L-asparaginase from the novel Fusarium falciforme AUMC 16563: extraction, purification, characterization, and cytotoxic effects on PC-3, HePG-2, HCT-116, and MCF-7 cell lines.Saleh AA, El-Aref HM, Ezzeldin AM, Ewida RM, Al-Bedak OAM.BMC Microbiol2025Cell lines, Apoptosis, Optimization, Submerged fermentation, Cancer therapy, L-asparaginase, Gene Expression, Fusarium Falciforme, Fusarium, Asparaginase, Fungal Proteins, Antineoplastic Agents10.1186/s12866-025-03833-840091012
Improved production of thermostable pectinase from novel Bacillus siamensis (BIOSMNF45) using computational-conventional approach.Satpathy A, Mukherjee K, Nigam VK.Sci Rep2025Fermentation medium, Process Optimization, Thermotolerant Bacteria, Conventional Approach (Ovat), Computational Approach (Rsm), Bacillus, Polygalacturonase10.1038/s41598-024-77167-240181006
Impact of a horizontally transferred Helitron family on genome evolution in Xenopus laevis.Li Z, Pollet N.Mob DNA2025Xenopus, Transposable element, vertebrate, Horizontal Transfer, Helitron10.1186/s13100-025-00356-x40241130
Enhanced production and purification of L-asparaginase from Bacillus paralicheniformis AUMC B-516 with potent cytotoxicity against MCF-7 cell lines.Saleh AA, El-Aref HM, Ezzeldin AM, Ewida RM, Al-Bedak OAM.AMB Express2025Bacillus, Purification, Optimization, Characterization, L-asparaginase, Cancer Cell Lines, Microbial Production10.1186/s13568-025-01890-wEnzymology40402326
Bioremediation of Cr(VI) using novel thermophilic bacteria Brevibacillus borstelensis SSAU-3 T: optimization, mechanism and phytotoxicity study.Agrawal M, Sharma A, Singh A, Sundaram S.Biodegradation2025Bioremediation, Industrialization, Phytotoxicity, Cr(vi) Toxicity, Thermophilic Microbe, Chromium, Water Pollutants, Chemical, Brevibacillus10.1007/s10532-025-10145-1Biotechnology40540070
Bacterial community profile of three Ethiopian hot springs based on 16S rRNA gene nanopore sequencing.Guta M, Van Eenooghe B, Bacha K, Cools P.Sci Rep2025Bacterial diversity, Ethiopia, Hot Springs, Nanopore Sequencing, Bacteria, RNA, Ribosomal, 16S, Hot Springs, Nanopore Sequencing10.1038/s41598-025-05139-1Phylogeny40603374
Functional and safety profiles of microbial communities in milk of ranched and nomadic goats and their predictive role in mycotoxin reduction.Akinyemi MO, Kleyn MS, Abdelmaksoud M, Van Wyk DAB, Adeleke RA, Ezekiel CN.World J Microbiol Biotechnol2025Bacteria, Yeast, Pathogen, Mycotoxin, Probiotic, Decontamination, Dairy10.1007/s11274-025-04507-340748401
Survival tactics of Bacillus licheniformis KNP under hexavalent chromium stress: a study of detoxification and chemotactic responses.Garg A, Ali M, Ahmad A, Chauhan P, Kumar A, Mishra R, Dubey VK, Srivastava A, Garg SK, Arora PK.Front Microbiol2025Chromium, Bacillus, Chemotaxis, Heavy metal, Detoxification10.3389/fmicb.2025.164651840980330
Emergence of human associated bacterial pathogens in Anabas testudineus reared in freshwater Biofloc systems.Chouhan N, Pavankalyan M, Devi R, Dekari D, Saha H, Chakraborty T.Sci Rep2025Bacterial diseases, Antibiotic Sensitivity, Anabas Testudineus, Reverse Zoonosis, Biofloc, Pathogenic Bacterial Community, Fishes, Bacteria, Fish Diseases, Fresh Water10.1038/s41598-025-20611-841120628
Bioprospecting and phylogenetic analysis of Priestia flexa AW3: an industrially significant amylase-producing bacterium from unexplored contaminated soil in Layyah.Ramzan S, Shaheen M, Khurshid M, Jabeen F, Mahmood S, Sarwar A, Ahmad S.J Ind Microbiol Biotechnol2024phylogenetics, Bioprospecting, Indigenous Bacteria, Industrial Potential, Soil Habitat, Amylases, Soil Microbiology, Bioprospecting10.1093/jimb/kuaf034Biotechnology41206767
Three eruptions at the Fagradalsfjall Volcano in Iceland show rapid and predictable microbial community establishment.Hadland N, Hamilton CW, Bjornsdottir S, Duhamel S.Commun Biol2025Volcanic Eruptions, Microbiota10.1038/s42003-025-09044-141286094

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
2604Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6347)https://www.dsmz.de/collection/catalogue/details/culture/DSM-6347
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
39035Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/16465
59095Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 51058)https://www.ccug.se/strain?id=51058
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68368Automatically annotated from API 20E
68371Automatically annotated from API 50CH acid
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
116899Curators of the CIPCollection of Institut Pasteur (CIP 104545)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104545
124043Isabel Schober, Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy
125438Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann10.1101/2024.08.12.607695Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets
125439Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardyhttps://github.com/GenomeNet/deepGdeepG: Deep Learning for Genome Sequence Data. R package version 0.3.1
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer10.1093/database/baaf059StrainInfo—the central database for linked microbial strain identifiers