General

@ref: 21709

BacDive-ID: 130219

DSM-Number: 23264

keywords: 16S sequence, mesophilic

description: Afipia sp. SG-6C is a mesophilic prokaryote that was isolated from pesticide -contaminated soil.

NCBI tax id

• NCBI tax id: 1871052
• Matching level: species

strain history

• @ref: 21709
• history: <- G. Pandey, CSIRO Entomology, Acton, Australia; SG-6C

doi: 10.13145/bacdive130219.20251217.10

Name and taxonomic classification

LPSN

• @ref: 20215
• description: kingdom/pseudomonadati
• keyword: phylum/pseudomonadota
• phylum: Pseudomonadota
• class: Alphaproteobacteria
• order: Hyphomicrobiales
• family: Nitrobacteraceae
• genus: Afipia
• species: Afipia sp.
• full scientific name: Afipia Brenner et al. 1992

• synonyms

  • @ref: 20215
  • synonym: Oligotropha

@ref: 21709

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Nitrobacteraceae

genus: Oligotropha

species: Oligotropha sp.

full scientific name: Oligotropha sp.

strain designation: SG-6C

type strain: no

Morphology

multimedia

• @ref: 21709
• multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_23264.jpg
• intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

• @ref: 21709
• name: R2A MEDIUM (DSMZ Medium 830)
• growth: yes
• link: https://mediadive.dsmz.de/medium/830
• composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

culture temp

• @ref: 21709
• growth: positive
• type: growth
• temperature: 28

Physiology and metabolism

compound production

• @ref: 21709
• compound: 6 chloronicotinic acid chlorohydrolase

Isolation, sampling and environmental information

isolation

• @ref: 21709
• sample type: pesticide (imidacloprid)-contaminated soil
• geographic location: Canberra, Acton
• country: Australia
• origin.country: AUS
• continent: Australia and Oceania

isolation source categories

Sequence information

16S sequences

• @ref: 21709
• description: Bradyrhizobiaceae bacterium SG-6C ribosomal RNA operon, complete sequence
• accession: GU324241
• length: 5378
• database: nuccore
• NCBI tax ID: 709797

Literature

@ref: 21709

culture collection no.: DSM 23264

straininfo link

• @ref: 126262
• straininfo: 402604

Reference