@ref: 22260
BacDive-ID: 130968
DSM-Number: 32035
keywords: genome sequence, 16S sequence, microaerophile, mesophilic
description: Limosilactobacillus reuteri I49 is a microaerophile, mesophilic prokaryote that was isolated from C57BL/6J wildtype mouse.
doi: 10.13145/bacdive130968.20251217.10
@ref: 22260
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Limosilactobacillus
species: Limosilactobacillus reuteri
full scientific name: Limosilactobacillus reuteri (Kandler et al. 1982) Zheng et al. 2020
strain designation: I49
type strain: no
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 125438 | no | 90 | |
| 125438 | 92.582 | positive |
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 22260 | microaerophile | |
| 125439 | microaerophile | 98 |
| @ref | description | assembly level | INSDC accession | IMG accession | NCBI tax ID | score | BV-BRC accession |
|---|---|---|---|---|---|---|---|
| 66792 | ASM168868v2 assembly for Limosilactobacillus reuteri I49 | complete | GCA_001688685 | 2718217763 | 1598 | 97.31 | |
| 66792 | ASM1669704v1 assembly for Limosilactobacillus reuteri I49 | chromosome | GCA_016697045 | 8003878414 | 1598 | 87.03 | 1598.1406 |
| 66792 | ASM222165v1 assembly for Limosilactobacillus reuteri I49 | contig | GCA_002221655 | 2902505161 | 1598 | 77.68 | 1598.349 |
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 92.582 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 83.879 | yes |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 92.803 | yes |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 89.656 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 97.375 | yes |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 90 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 86 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | no | 82 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | positive | 88.4 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | microaerophile | 98 |
@ref: 22260
culture collection no.: DSM 32035
| title | authors | journal | year | mesh | Pubmed-ID | DOI | topic |
|---|---|---|---|---|---|---|---|
| The human intestinal bacterium Eggerthella lenta influences gut metabolomes in gnotobiotic mice | Viehof A, Haange S, Streidl T, Schubert K, Engelmann B, Haller D, Rolle-Kampczyk U, von Bergen M, Clavel T. | Microbiome Res Rep | 2024 | Proteomics, Metabolomics, Gut Microbiota, Gut-liver Axis, Eggerthella Lenta, Oligo-mouse-microbiota | |||
| Nutritional and host environments determine community ecology and keystone species in a synthetic gut bacterial community. | Weiss AS, Niedermeier LS, von Strempel A, Burrichter AG, Ring D, Meng C, Kleigrewe K, Lincetto C, Hubner J, Stecher B. | Nat Commun | 2023 | Microbiota, Gastrointestinal Microbiome | 37553336 | 10.1038/s41467-023-40372-0 | |
| Bacteriophages targeting protective commensals impair resistance against Salmonella Typhimurium infection in gnotobiotic mice. | von Strempel A, Weiss AS, Wittmann J, Salvado Silva M, Ring D, Wortmann E, Clavel T, Debarbieux L, Kleigrewe K, Stecher B. | PLoS Pathog | 2023 | Bacteriophages, Salmonella Infections, Microbiota, Gastrointestinal Microbiome | 37603558 | 10.1371/journal.ppat.1011600 | |
| In vitro and in vivo selection and cost of bacteriophage resistance on natural Escherichia coli. | Cardoso LL, Gaissmaier MS, von Strempel A, Keys T, Matchado MS, Salvado Silva M, Ring D, Slack E, Stecher B. | Microlife | 2025 | Mutations, Diarrhea, Intestinal Infection, Phage Therapy, Eskape, Phage Efficacy, Within Host Evolution | 40837842 | 10.1093/femsml/uqaf017 | Pathogenicity |
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 22260 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-32035 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 32035) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG | |
| 126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer | StrainInfo—the central database for linked microbial strain identifiers | 10.1093/database/baaf059 |
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