Archive BacDiveID:10.13145/bacdive131361.20251217.10

Cite the latest
BacDive paper

Rate our new design

BacDive ID 131361

Type strain

Strain Designation S1-9

Culture col. no. DSM 100926 CCTCC AB 2014290 JCM 30613 S1-9

NCBI tax ID(s) 1585241

Links

« back to strain detail view

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 22588

BacDive-ID: 131361

DSM-Number: 100926

keywords: 16S sequence, mesophilic

description: Paenibacillus qingshengii S1-9 is a mesophilic prokaryote that was isolated from lead-zinc tailing.

NCBI tax id

NCBI tax id: 1585241
Matching level: species

strain history

@ref	history
22588	<- JCM <- X. Sheng, Nanjing Agric. Univ., China; S1-9
67770	X. F. Sheng; Nanjing Agric. Univ., China; S1-9.

doi: 10.13145/bacdive131361.20251217.10

Name and taxonomic classification

LPSN

@ref: 20215
description: kingdom/bacillati
keyword: phylum/bacillota
phylum: Bacillota
class: Bacilli
order: Caryophanales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus qingshengii
full scientific name: Paenibacillus qingshengii Chen et al. 2015

@ref: 22588

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus qingshengii

full scientific name: Paenibacillus qingshengii Chen et al. 2015

strain designation: S1-9

type strain: yes

Culture and growth conditions

culture medium

@ref: 22588
name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
growth: yes
link: https://mediadive.dsmz.de/medium/220
composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

@ref	growth	type	temperature
22588	positive	growth	30
67770	positive	growth	28

Physiology and metabolism

observation

@ref: 67770
observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

@ref	sample type	geographic location	country	origin.country	continent
22588	lead-zinc tailing	Nanjing, Jiangsu Province	China	CHN	Asia
67770	Lead-zinc tailing in Nanjing	Jiangsu Province	China	CHN	Asia

isolation source categories

Cat1: #Engineered
Cat2: #Other

taxonmaps

@ref: 69479
File name: preview.99_7409.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_3465;97_4250;98_5431;99_7409&stattab=map
Last taxonomy: Paenibacillus
16S sequence: KP027419
Sequence Identity:
Total samples: 678
soil counts: 432
aquatic counts: 37
animal counts: 92
plant counts: 117

Interaction and safety

risk assessment

@ref: 22588
biosafety level: 1
biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@ref: 22588
description: Paenibacillus qingshengii strain S1-9 16S ribosomal RNA gene, partial sequence
accession: KP027419
length: 1477
database: nuccore
NCBI tax ID: 1585241

GC content

@ref	GC-content	method
22588	49.9
67770	49.9	high performance liquid chromatography (HPLC)

Literature

@ref: 22588

culture collection no.: DSM 100926, CCTCC AB 2014290, JCM 30613

straininfo link

@ref: 126262
straininfo: 402788

literature

topic: Phylogeny
Pubmed-ID: 25858246
title: Paenibacillus qingshengii sp. nov., isolated from a lead-zinc tailing.
authors: Chen L, Wang L, Sheng XF
journal: Int J Syst Evol Microbiol
DOI: 10.1099/ijs.0.000232
year: 2015
mesh: Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, *Mining, Molecular Sequence Data, Nucleic Acid Hybridization, Paenibacillus/*classification/genetics/isolation & purification, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry, Zinc
topic2: Genetics

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
22588	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-100926	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 100926)
67770	Curators of the JCM		https://jcm.brc.riken.jp/en/
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.	MicrobeAtlas 1.0 beta	https://microbeatlas.org/
126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer	StrainInfo—the central database for linked microbial strain identifiers	10.1093/database/baaf059

Rate our new design

Content

About us

Archive

General

NCBI tax id

strain history

Name and taxonomic classification

LPSN

Culture and growth conditions

culture medium

culture temp

Physiology and metabolism

observation

Isolation, sampling and environmental information

isolation

isolation source categories

taxonmaps

Interaction and safety

risk assessment

Sequence information

16S sequences

GC content

Literature

straininfo link

literature

Reference

BacDive

Help

Social Media