@ref: 34732
BacDive-ID: 135562
keywords: genome sequence, mesophilic, Gram-negative, oval-shaped
description: Acinetobacter baumannii 12A133 is a mesophilic, Gram-negative, oval-shaped prokaryote of the family Moraxellaceae.
| NCBI tax id | Matching level |
|---|---|
| 1217643 | strain |
| 470 | species |
doi: 10.13145/bacdive135562.20251217.10
@ref: 34732
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter baumannii
strain designation: 12A133
type strain: no
| @ref | gram stain | confidence | cell shape | motility |
|---|---|---|---|---|
| 125438 | negative | 98 | ||
| 125439 | negative | 90.9 | ||
| 34732 | negative | oval-shaped | no |
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 34732 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 34732 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 125438 | aerobe | 90.121 |
| 125439 | obligate aerobe | 98.1 |
| @ref | spore formation | confidence |
|---|---|---|
| 125438 | no | 93.898 |
| 125439 | no | 97.1 |
| @ref | geographic location | country | origin.country | continent | sample type | isolation date |
|---|---|---|---|---|---|---|
| 34732 | Utrecht | Netherlands | NLD | Europe | ||
| 34732 | Utrecht | Netherlands | NLD | Europe | Human, Blood | 1997 |
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | obligate aerobe | 98.1 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | negative | 90.9 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | yes | 52.4 | |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 97.1 | |
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 98 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 98.333 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 90.121 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 93.898 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 99.975 | yes |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 76.179 | no |
@ref: 34732
culture collection no.: CIP 110464, NIPH 1669
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 24277043 | Identification of 50 class D beta-lactamases and 65 Acinetobacter-derived cephalosporinases in Acinetobacter spp. | Perichon B, Goussard S, Walewski V, Krizova L, Cerqueira G, Murphy C, Feldgarden M, Wortman J, Clermont D, Nemec A, Courvalin P. | Antimicrob Agents Chemother | 10.1128/aac.01261-13 | 2014 | genetics, classification, genetics, Phylogeny | |
| Enzymology | 25336457 | Origin in Acinetobacter guillouiae and dissemination of the aminoglycoside-modifying enzyme Aph(3')-VI. | Yoon EJ, Goussard S, Touchon M, Krizova L, Cerqueira G, Murphy C, Lambert T, Grillot-Courvalin C, Nemec A, Courvalin P. | mBio | 10.1128/mbio.01972-14 | 2014 | enzymology, genetics, genetics | |
| Genetics | 26195261 | A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii. | Chan AP, Sutton G, DePew J, Krishnakumar R, Choi Y, Huang XZ, Beck E, Harkins DM, Kim M, Lesho EP, Nikolich MP, Fouts DE. | Genome Biol | 10.1186/s13059-015-0701-6 | 2015 | Chromosomes, Bacterial, genetics, methods, Genome, Bacterial | |
| 27471549 | Genome sequence of OXA-23 producing Acinetobacter baumannii IHIT7853, a carbapenem-resistant strain from a cat belonging to international clone IC1. | Ewers C, Klotz P, Scheufen S, Leidner U, Gottig S, Semmler T. | Gut Pathog | 10.1186/s13099-016-0119-z | 2016 | Acinetobacter, Animal, Carbapenemase, Oxa-23 | ||
| 28152054 | A new subclass of intrinsic aminoglycoside nucleotidyltransferases, ANT(3")-II, is horizontally transferred among Acinetobacter spp. by homologous recombination. | Zhang G, Leclercq SO, Tian J, Wang C, Yahara K, Ai G, Liu S, Feng J. | PLoS Genet | 10.1371/journal.pgen.1006602 | 2017 | genetics, genetics, genetics, Gene Transfer, Horizontal, Homologous Recombination | ||
| 28459877 | Database for the ampC alleles in Acinetobacter baumannii. | Karah N, Jolley KA, Hall RM, Uhlin BE. | PLoS One | 10.1371/journal.pone.0176695 | 2017 | genetics, genetics, Alleles, Databases, Nucleic Acid | ||
| Genetics | 28594944 | Development and evaluation of a core genome multilocus typing scheme for whole-genome sequence-based typing of Acinetobacter baumannii. | Higgins PG, Prior K, Harmsen D, Seifert H. | PLoS One | 10.1371/journal.pone.0179228 | 2017 | genetics, methods, Genome, Bacterial, methods | |
| Pathogenicity | 29259044 | Deciphering Multifactorial Resistance Phenotypes in Acinetobacter baumannii by Genomics and Targeted Label-free Proteomics. | Cecchini T, Yoon EJ, Charretier Y, Bardet C, Beaulieu C, Lacoux X, Docquier JD, Lemoine J, Courvalin P, Grillot-Courvalin C, Charrier JP. | Mol Cell Proteomics | 10.1074/mcp.ra117.000107 | 2018 | drug effects, pharmacology, metabolism, pharmacology, physiology | Metabolism |
| Phylogeny | 35166651 | Genomic and phenotypic analyses of diverse non-clinical Acinetobacter baumannii strains reveals strain-specific virulence and resistance capacity. | Hamidian M, Maharjan RP, Farrugia DN, Delgado NN, Dinh H, Short FL, Kostoulias X, Peleg AY, Paulsen IT, Cain AK. | Microb Genom | 10.1099/mgen.0.000765 | 2022 | Resistance, Acinetobacter baumannii, Virulence, Environmental, Galleria mellonella, niche adaptation, Genome sequence, Mlst, classification, genetics, genetics, Genomics, Phylogeny, genetics | Genetics |
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 34732 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110464 | Collection of Institut Pasteur (CIP 110464) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG | |
| 126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer | StrainInfo—the central database for linked microbial strain identifiers | 10.1093/database/baaf059 |
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