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BacDive ID 136025
Type strain
Culture col. no. CIP 101883
NCBI tax ID(s) 43765
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 35325

BacDive-ID: 136025

keywords: obligate aerobe, mesophilic, Gram-positive, rod-shaped

description: Corynebacterium amycolatum CIP 101883 is an obligate aerobe, mesophilic, Gram-positive prokaryote of the family Corynebacteriaceae.

NCBI tax id

  • NCBI tax id: 43765
  • Matching level: species

strain history

@refhistory
353251985, Lab. Ident. Inst. Pasteur, Paris, France
35325CIP <- 1985, Lab. Ident. Inst. Pasteur, Paris, France

doi: 10.13145/bacdive136025.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/bacillati
  • keyword: phylum/actinomycetota
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Corynebacteriaceae
  • genus: Corynebacterium
  • species: Corynebacterium amycolatum
  • full scientific name: Corynebacterium amycolatum Collins et al. 1988

@ref: 35325

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Corynebacteriaceae

genus: Corynebacterium

species: Corynebacterium amycolatum

type strain: no

Morphology

cell morphology

  • @ref: 35325
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 35325

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35325MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
35325CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperature
35325positivegrowth37
35325positivegrowth25-41
35325negativegrowth10
35325negativegrowth15
35325negativegrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 35325
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
35325NaClpositivegrowth0-4 %
35325NaClnogrowth6 %
35325NaClnogrowth8 %
35325NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3532516947citrate-carbon source
353254853esculin-hydrolysis
35325606565hippurate+hydrolysis
3532517632nitrate-reduction
3532516301nitrite-reduction
3532517632nitrate-respiration
68371Potassium 5-ketogluconate-builds acid from
6837128847D-fucose-builds acid from
6837118287L-fucose-builds acid from
6837162318D-lyxose-builds acid from
6837116443D-tagatose-builds acid from
6837117992sucrose-builds acid from
6837127082trehalose-builds acid from
6837128053melibiose-builds acid from
6837159640N-acetylglucosamine-builds acid from
6837112936D-galactose-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837117716lactose-builds acid from
6837117306maltose+builds acid from
6837117057cellobiose-builds acid from
6837117814salicin-builds acid from
683714853esculin-builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol-builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose-builds acid from
6837117634D-glucose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose+builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from

antibiotic resistance

  • @ref: 35325
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 35325
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3532515688acetoin-
3532517234glucose+

enzymes

@refvalueactivityec
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382esterase lipase (C 8)+
68382lipase (C 14)-
35325oxidase-
35325beta-galactosidase-3.2.1.23
35325alcohol dehydrogenase-1.1.1.1
35325gelatinase-
35325amylase+
35325DNase-
35325caseinase-3.4.21.50
35325catalase+1.11.1.6
35325tween esterase-
35325gamma-glutamyltransferase-2.3.2.2
35325lecithinase-
35325lipase-
35325lysine decarboxylase-4.1.1.18
35325ornithine decarboxylase-4.1.1.17
35325phenylalanine ammonia-lyase-4.3.1.24
35325protease-
35325tryptophan deaminase-
35325urease-3.5.1.5
68382acid phosphatase+3.1.3.2
68382trypsin-3.4.21.4
68382leucine arylamidase+3.4.11.1
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
35325-+++-+----+---------

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
35325----+-----++/----------------+---------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
35325+----+---++--------------------------------------------------------------------++------------------

Interaction and safety

risk assessment

  • @ref: 35325
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

Literature

@ref: 35325

culture collection no.: CIP 101883

straininfo link

  • @ref: 126262
  • straininfo: 101444

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35325Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20101883Collection of Institut Pasteur (CIP 101883)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059

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