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BacDive ID 137310
Type strain
Strain Designation MB 367
Culture col. no. CIP 105924 ATCC 10697 NCIMB 8170 CECT 374 BCRC 14003 JCM 1107 MB 367 2 more
NCBI tax ID(s) 29397
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 9.3 (current version):
version 9.3 (current version)

General

@ref: 37231

BacDive-ID: 137310

keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic

description: Lactobacillus delbrueckii subsp. lactis MB 367 is a facultative anaerobe, mesophilic bacterium of the family Lactobacillaceae.

NCBI tax id

  • NCBI tax id: 29397
  • Matching level: subspecies

strain history

@refhistory
67770T. Mitsuoka S1-36 <-- M. E. Sharpe L-20 <-- ATCC 10697 <-- Merck & Co., Inc.; MB 367.
37231CIP <- 1999, ATCC <- Merck &Co. Inc: strain MB 367

doi: 10.13145/bacdive137310.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Lactobacillus
  • species: Lactobacillus delbrueckii subsp. lactis
  • full scientific name: Lactobacillus delbrueckii subsp. lactis (Orla-Jensen 1919) Weiss et al. 1984

  • synonyms

    @refsynonym
    20215Thermobacterium lactis
    20215Lactobacillus lactis

@ref: 37231

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lactobacillus

species: Lactobacillus delbrueckii subsp. lactis

strain designation: MB 367

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram staincell shape
125438no95.5
12543894.745positive
37231nopositiverod-shaped

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
37231MEDIUM 40- for Lactobacillus and LeuconostocyesDistilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
37231CIP Medium 40yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40

culture temp

@refgrowthtypetemperature
37231positivegrowth37
67770positivegrowth37
37231positivegrowth22-37
37231nogrowth10
37231nogrowth15
37231nogrowth45

Physiology and metabolism

oxygen tolerance

@refoxygen toleranceconfidence
37231facultative anaerobe
125439anaerobe96.9

spore formation

  • @ref: 125439
  • spore formation: no
  • confidence: 97.1

compound production

  • @ref: 67770
  • compound: Lacticin

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3723117632nitrate-reduction
3723116301nitrite-reduction
3723117632nitrate+respiration
68371Potassium 5-ketogluconate-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837117754glycerol-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose-builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117716lactose+builds acid from
6837117306maltose-builds acid from
6837117057cellobiose-builds acid from
6837117814salicin-builds acid from
683714853esculin-builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol-builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from

metabolite tests

  • @ref: 37231
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-galactosidase-3.2.1.22
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382alkaline phosphatase-3.1.3.1
37231oxidase-
37231alcohol dehydrogenase-1.1.1.1
37231catalase-1.11.1.6
37231lysine decarboxylase-4.1.1.18
37231ornithine decarboxylase-4.1.1.17
68382alpha-mannosidase-3.2.1.24

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
37231--+-------++-+-++---

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
37231----------+++/---------+/-------+-+------------------

Safety information

risk assessment

  • @ref: 37231
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

  • @ref: 124043
  • description: Lactobacillus delbrueckii subsp. lactis gene for 16S rRNA, partial sequence, strain: JCM 1107.
  • accession: AB289091
  • length: 664
  • database: nuccore
  • NCBI tax ID: 29397

Genome sequences

  • @ref: 66792
  • description: Lactobacillus delbrueckii subsp. lactis NCIMB 8170
  • accession: GCA_021134415
  • assembly level: contig
  • database: ncbi
  • NCBI tax ID: 29397

Genome-based predictions

predictions

@refmodeltraitdescriptionpredictionconfidencetraining_data
125438gram-positivegram-positivePositive reaction to Gram-stainingyes94.745no
125438anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no78.587no
125438aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)no98.219no
125438spore-formingspore-formingAbility to form endo- or exosporesno89.822no
125438thermophilethermophilicAbility to grow at temperatures above or equal to 45°Cno94.984yes
125438motile2+flagellatedAbility to perform flagellated movementno95.5no
125439BacteriaNetspore_formationAbility to form endo- or exosporesno97.1
125439BacteriaNetmotilityAbility to perform movementno75.8
125439BacteriaNetgram_stainReaction to gram-stainingnegative88.5
125439BacteriaNetoxygen_toleranceOxygenic conditions needed for growthanaerobe96.9

External links

@ref: 37231

culture collection no.: CIP 105924, ATCC 10697, JCM 1107, BCRC 14003, CECT 374, NCIMB 8170

straininfo link

  • @ref: 94245
  • straininfo: 35247

literature

  • topic: Metabolism
  • Pubmed-ID: 31302724
  • title: Engineering Lactococcus lactis for D-Lactic Acid Production from Starch.
  • authors: Aso Y, Hashimoto A, Ohara H
  • journal: Curr Microbiol
  • DOI: 10.1007/s00284-019-01742-4
  • year: 2019
  • mesh: Bacterial Proteins/genetics/metabolism, Fermentation, *Genetic Engineering, Glucose/metabolism, L-Lactate Dehydrogenase/genetics/metabolism, Lactate Dehydrogenases/genetics/metabolism, Lactic Acid/*metabolism, Lactobacillus delbrueckii/genetics, Lactococcus lactis/enzymology/*genetics/growth & development/*metabolism, Starch/*metabolism, Streptococcus bovis/genetics, alpha-Amylases/genetics/metabolism
  • topic2: Enzymology

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
37231Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105924Collection of Institut Pasteur (CIP 105924)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
94245Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID35247.1
124043Isabel Schober, Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy
125438Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg OvermannPredicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets10.1101/2024.08.12.607695
125439Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardydeepG: Deep Learning for Genome Sequence Data. R package version 0.3.1https://github.com/GenomeNet/deepG

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