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BacDive ID 13816
Type strain
Strain Designation Si 4
Culture col. no. DSM 8371 Si 4
NCBI tax ID(s) 1063
Links
version 11 (current version)

General

@ref: 3269

BacDive-ID: 13816

DSM-Number: 8371

keywords: Bacteria, anaerobe

description: Cereibacter sphaeroides Si 4 is an anaerobe bacterium that was isolated from pond water.

NCBI tax id

  • NCBI tax id: 1063
  • Matching level: species

strain history

  • @ref: 3269
  • history: DSMZ <- F. Giffhorn, Si 4

doi: 10.13145/bacdive13816.20260601.11

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodobacterales
  • family: Paracoccaceae
  • genus: Cereibacter
  • species: Cereibacter sphaeroides
  • full scientific name: Cereibacter sphaeroides (van Niel 1944) Hördt et al. 2020
  • synonyms

    @refsynonym
    20215Rhodobacter sphaeroides
    20215Luteovulum sphaeroides
    20215Rhodopseudomonas sphaeroides

@ref: 3269

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodobacterales

family: Rhodobacteraceae

genus: Cereibacter

species: Cereibacter sphaeroides

full scientific name: Cereibacter sphaeroides (van Niel 1944) Hördt et al. 2020

strain designation: Si 4

type strain: no

Culture and growth conditions

culture medium

  • @ref: 3269
  • name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/27
  • composition: Name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27) Composition: Disodium succinate 1.0 g/l KH2PO4 0.5 g/l Ammonium acetate 0.5 g/l NaCl 0.4 g/l NH4Cl 0.4 g/l MgSO4 x 7 H2O 0.4 g/l Yeast extract 0.3 g/l L-Cysteine HCl 0.3 g/l CaCl2 x 2 H2O 0.05 g/l Fe(III) citrate 0.005 g/l Resazurin 0.005 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Vitamin B12 Distilled water

culture temp

  • @ref: 3269
  • growth: positive
  • type: growth
  • temperature: 28

Physiology and metabolism

oxygen tolerance

  • @ref: 3269
  • oxygen tolerance: anaerobe

compound production

@refcompound
3269D-(-) tartratdehydratase
3269mannitoldehydrogenase
3269ribitoldehydrogenase
3269dehydrogenase

Isolation, sampling and environmental information

isolation

  • @ref: 3269
  • sample type: pond water
  • country: Singapore
  • origin.country: SGP
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Pond (small)

Interaction and safety

risk assessment

  • @ref: 3269
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Literature

@ref: 3269

culture collection no.: DSM 8371

straininfo link

  • @ref: 126262
  • straininfo: 48473

literature

  • topic: Enzymology
  • Pubmed-ID: 2789134
  • title: Purification and properties of a polyol dehydrogenase from the phototrophic bacterium Rhodobacter sphaeroides.
  • authors: Schneider KH, Giffhorn F
  • journal: Eur J Biochem
  • DOI: 10.1111/j.1432-1033.1989.tb14984.x
  • year: 1989
  • mesh: Chromatography, Gel, Chromatography, Ion Exchange, Isoelectric Focusing, Kinetics, Rhodobacter sphaeroides/*enzymology/growth & development, Substrate Specificity, Sugar Alcohol Dehydrogenases/*isolation & purification/metabolism, Sugar Alcohols/metabolism
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
3269Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 8371)https://www.dsmz.de/collection/catalogue/details/culture/DSM-8371
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer10.1093/database/baaf059StrainInfo—the central database for linked microbial strain identifiers