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BacDive ID 138200
Type strain
Culture col. no. CIP 105344 CCUG 46353
NCBI tax ID(s) 213
Links
version 10 (current version)

General

@ref: 39270

BacDive-ID: 138200

keywords: microaerophile, mesophilic, Gram-negative, motile, rod-shaped

description: Helicobacter cinaedi CIP 105344 is a microaerophile, mesophilic, Gram-negative prokaryote of the family Helicobacteraceae.

NCBI tax id

  • NCBI tax id: 213
  • Matching level: species

strain history

  • @ref: 39270
  • history: CIP <- 1997, N.L. Trivett-Moore, Westmead Hosp., Westmead, Australia: strain N/A, "Helicobacter westmeadii"

doi: 10.13145/bacdive138200.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Helicobacteraceae
  • genus: Helicobacter
  • species: Helicobacter cinaedi
  • full scientific name: Helicobacter cinaedi (Totten et al. 1988) Vandamme et al. 1991
  • synonyms

    • @ref: 20215
    • synonym: Campylobacter cinaedi

@ref: 39270

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Helicobacteraceae

genus: Helicobacter

species: Helicobacter cinaedi

type strain: no

Morphology

cell morphology

  • @ref: 39270
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 39270

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39270MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
39270Brucella brothyes
39270CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6

culture temp

@refgrowthtypetemperature
39270positivegrowth37
39270positivegrowth30-37
39270negativegrowth5
39270negativegrowth10
39270negativegrowth25
39270negativegrowth41
39270negativegrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 39270
  • oxygen tolerance: microaerophile

halophily

  • @ref: 39270
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 3.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
39270606565hippurate-hydrolysis
3927017632nitrate-reduction
3927016301nitrite-reduction

metabolite production

  • @ref: 39270
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382leucine arylamidase+3.4.11.1
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
39270oxidase+
39270gelatinase-
39270DNase-
39270catalase+1.11.1.6
39270gamma-glutamyltransferase-2.3.2.2
39270urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39270-+++-+----++---+----

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
39270Sydney, NSWAustraliaAUSAustralia and Oceania
57162NSW,SydneyAustraliaAUSAustralia and OceaniaHuman blood1994
39270Sydney, New South WalesAustraliaAUSAustralia and OceaniaHuman, Blood1994

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood

Interaction and safety

risk assessment

  • @ref: 39270
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

Literature

@ref: 39270

culture collection no.: CIP 105344, CCUG 46353

straininfo link

  • @ref: 126262
  • straininfo: 68849

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39270Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105344Collection of Institut Pasteur (CIP 105344)
57162Curators of the CCUGhttps://www.ccug.se/strain?id=46353Culture Collection University of Gothenburg (CCUG) (CCUG 46353)
68382Automatically annotated from API zym
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059