@ref: 41290
BacDive-ID: 139200
keywords: genome sequence, 16S sequence, microaerophile, mesophilic, Gram-negative, motile, rod-shaped
description: Helicobacter canis CIP 104753 is a microaerophile, mesophilic, Gram-negative prokaryote of the family Helicobacteraceae.
doi: 10.13145/bacdive139200.20251217.10
@ref: 41290
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Helicobacteraceae
genus: Helicobacter
species: Helicobacter canis
type strain: yes
| @ref | gram stain | confidence | cell shape | motility |
|---|---|---|---|---|
| 125439 | negative | 98.2 | ||
| 125438 | negative | 96.977 | ||
| 41290 | negative | rod-shaped | yes |
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 41290 | MEDIUM 45 - for Columbia agar with sheep blood | yes | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml) | |
| 41290 | CIP Medium 45 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=45 |
| @ref | growth | type | temperature |
|---|---|---|---|
| 41290 | positive | growth | 37 |
| 51162 | positive | growth | 37 |
| 41290 | positive | growth | 37-41 |
| 41290 | negative | growth | 5 |
| 41290 | negative | growth | 10 |
| 41290 | negative | growth | 25 |
| 41290 | negative | growth | 30 |
| 41290 | negative | growth | 45 |
| @ref | spore formation | confidence |
|---|---|---|
| 125439 | no | 99.6 |
| 125438 | no | 94.057 |
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68373 | 16199 | urea | - | hydrolysis |
| 68373 | 17632 | nitrate | - | reduction |
| 68373 | 606565 | hippurate | - | hydrolysis |
| 68373 | 78019 | triphenyltetrazolium chloride | + | reduction |
| 68373 | 17634 | D-glucose | - | assimilation |
| 68373 | 30031 | succinate | - | assimilation |
| 68373 | 30089 | acetate | - | assimilation |
| 68373 | 17272 | propionate | - | assimilation |
| 68373 | 25115 | malate | - | assimilation |
| 68373 | 16947 | citrate | - | assimilation |
| 41290 | 606565 | hippurate | - | hydrolysis |
| 41290 | 17632 | nitrate | - | reduction |
| 41290 | 16301 | nitrite | - | reduction |
| @ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. | is resistant |
|---|---|---|---|---|---|---|
| 68373 | 48923 | erythromycin | yes | yes | 14 µg | |
| 68373 | 100147 | nalidixic acid | yes | yes | 84 µg | |
| 41290 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) | yes | yes | no | ||
| 68373 | 474053 | cefazolin | yes | yes | 224 µg |
| @ref | Chebi-ID | metabolite | production |
|---|---|---|---|
| 68373 | 16136 | hydrogen sulfide | no |
| 41290 | 35581 | indole | no |
| @ref | value | activity | ec |
|---|---|---|---|
| 68382 | alpha-fucosidase | - | 3.2.1.51 |
| 68382 | alpha-mannosidase | - | 3.2.1.24 |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
| 68382 | alpha-glucosidase | + | 3.2.1.20 |
| 68382 | beta-glucuronidase | - | 3.2.1.31 |
| 68382 | beta-galactosidase | - | 3.2.1.23 |
| 68382 | alpha-galactosidase | - | 3.2.1.22 |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | |
| 68382 | acid phosphatase | + | 3.1.3.2 |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 |
| 68382 | trypsin | - | 3.4.21.4 |
| 68382 | cystine arylamidase | - | 3.4.11.3 |
| 68382 | valine arylamidase | - | |
| 68382 | leucine arylamidase | + | 3.4.11.1 |
| 68382 | lipase (C 14) | - | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 |
| 68382 | esterase (C 4) | + | |
| 41290 | oxidase | + | |
| 41290 | gelatinase | - | |
| 41290 | DNase | - | |
| 41290 | catalase | + | 1.11.1.6 |
| 41290 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 41290 | urease | - | 3.5.1.5 |
| 68373 | catalase | - | 1.11.1.6 |
| 68373 | L-arginine arylamidase | - | |
| 68373 | L-aspartate arylamidase | - | 3.4.11.21 |
| 68373 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68373 | gamma-glutamyltransferase | + | 2.3.2.2 |
| 68373 | esterase | + | |
| 68373 | urease | - | 3.5.1.5 |
| 68373 | alkaline phosphatase | + | 3.1.3.1 |
| 68382 | beta-glucosidase | - | 3.2.1.21 |
| 68382 | esterase lipase (C 8) | + |
| @ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41290 | - | + | + | + | - | + | - | - | - | - | + | + | - | - | - | + | - | - | - | - |
| @ref | URE | NIT | EST | HIP | GGT | TTC | PYRA | ArgA | AspA | PAL | H2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | ERO | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51162 | - | - | + | - | + | + | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - |
| @ref | country | origin.country | continent | sample type | sampling date | geographic location |
|---|---|---|---|---|---|---|
| 41290 | Switzerland | CHE | Europe | |||
| 51162 | Switzerland | CHE | Europe | Dog feces,domestic,with diarrhoeal illness | 1990 | Berne |
| 41290 | Switzerland | CHE | Europe | Animal, Dog, diarrhea |
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Canidae (Dog) |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
| #Infection | #Disease |
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 96.977 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 76.163 | yes |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 94.057 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 82.17 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 85.985 | yes |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | yes | 64.279 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 99.6 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | yes | 50.5 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | negative | 98.2 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | microaerophile | 89.2 |
@ref: 41290
culture collection no.: CIP 104753, ATCC 51401, NCTC 12739, CCUG 32756
| Pubmed-ID | title | authors | journal | DOI | year | mesh | topic | topic2 |
|---|---|---|---|---|---|---|---|---|
| 7518076 | An intervening sequence (IVS) in the 16S rRNA gene of the eubacterium Helicobacter canis. | Linton D, Clewley JP, Burnens A, Owen RJ, Stanley J. | Nucleic Acids Res | 10.1093/nar/22.11.1954 | 1994 | genetics, genetics, Introns | ||
| 7790451 | Identification of Campylobacter jejuni on the basis of a species-specific gene that encodes a membrane protein. | Stucki U, Frey J, Nicolet J, Burnens AP. | J Clin Microbiol | 10.1128/jcm.33.4.855-859.1995 | 1995 | genetics, genetics, Genes, Bacterial | ||
| 8254320 | Helicobacter canis sp. nov., a new species from dogs: an integrated study of phenotype and genotype. | Stanley J, Linton D, Burnens AP, Dewhirst FE, Owen RJ, Porter A, On SL, Costas M | J Gen Microbiol | 10.1099/00221287-139-10-2495 | 1993 | Animals, Bacterial Proteins/analysis, Base Composition, Base Sequence, Chromosomes, Bacterial/chemistry, Cloning, Molecular, DNA Probes, DNA, Bacterial/chemistry/genetics, Dogs/*microbiology, Genotype, Helicobacter/*classification/*genetics/ultrastructure, Humans, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Phylogeny | Genetics |
| 8880504 | Helicobacter canis isolated from a dog liver with multifocal necrotizing hepatitis. | Fox JG, Drolet R, Higgins R, Messier S, Yan L, Coleman BE, Paster BJ, Dewhirst FE. | J Clin Microbiol | 10.1128/jcm.34.10.2479-2482.1996 | 1996 | microbiology, isolation & purification, microbiology, microbiology, microbiology | Enzymology | Phylogeny |
| 9542907 | Identification of a novel enteric Helicobacter species in a kitten with severe diarrhea. | Foley JE, Solnick JV, Lapointe JM, Jang S, Pedersen NC. | J Clin Microbiol | 10.1128/jcm.36.4.908-912.1998 | 1998 | isolation & purification, microbiology, veterinary | Enzymology | Phylogeny |
| 9758832 | Isolation and identification of Helicobacter spp. from canine and feline gastric mucosa. | Jalava K, On SL, Vandamme PA, Happonen I, Sukura A, Hanninen ML. | Appl Environ Microbiol | 10.1128/aem.64.10.3998-4006.1998 | 1998 | microbiology, isolation & purification, veterinary, microbiology, microbiology | Enzymology | Phylogeny |
| 9854080 | Novel intestinal Helicobacter species isolated from cotton-top tamarins (Saguinus oedipus) with chronic colitis. | Saunders KE, Shen Z, Dewhirst FE, Paster BJ, Dangler CA, Fox JG. | J Clin Microbiol | 10.1128/jcm.37.1.146-151.1999 | 1999 | Saguinus, isolation & purification, veterinary, veterinary, microbiology | Enzymology | Phylogeny |
| 10074528 | Characterization of a culturable "Gastrospirillum hominis" (Helicobacter heilmannii) strain isolated from human gastric mucosa. | Andersen LP, Boye K, Blom J, Holck S, Norgaard A, Elsborg L. | J Clin Microbiol | 10.1128/jcm.37.4.1069-1076.1999 | 1999 | microbiology, isolation & purification, isolation & purification, microbiology, microbiology | Enzymology | Phylogeny |
| 10200957 | Essential role of Helicobacter pylori gamma-glutamyltranspeptidase for the colonization of the gastric mucosa of mice. | Chevalier C, Thiberge JM, Ferrero RL, Labigne A. | Mol Microbiol | 10.1046/j.1365-2958.1999.01271.x | 1999 | microbiology, enzymology, pathogenicity, physiology | Enzymology | |
| 10203471 | Serological discrimination of dogs infected with gastric Helicobacter spp. and uninfected dogs. | Strauss-Ayali D, Simpson KW, Schein AH, McDonough PL, Jacobson RH, Valentine BA, Peacock J. | J Clin Microbiol | 10.1128/jcm.37.5.1280-1287.1999 | 1999 | microbiology, immunology, immunology | ||
| 10405434 | An uncommon Helicobacter isolate from blood: evidence of a group of Helicobacter spp. pathogenic in AIDS patients. | Weir SC, Gibert CL, Gordin FM, Fischer SH, Gill VJ. | J Clin Microbiol | 10.1128/jcm.37.8.2729-2733.1999 | 1999 | genetics, isolation & purification, microbiology, microbiology | Enzymology | Phylogeny |
| 10488191 | Isolation of Helicobacter canis from a colony of bengal cats with endemic diarrhea. | Foley JE, Marks SL, Munson L, Melli A, Dewhirst FE, Yu S, Shen Z, Fox JG. | J Clin Microbiol | 10.1128/jcm.37.10.3271-3275.1999 | 1999 | microbiology, isolation & purification, microbiology, veterinary | Enzymology | Phylogeny |
| 10565952 | Rapid identification of Campylobacter, Arcobacter, and Helicobacter isolates by PCR-restriction fragment length polymorphism analysis of the 16S rRNA gene. | Marshall SM, Melito PL, Woodward DL, Johnson WM, Rodgers FG, Mulvey MR. | J Clin Microbiol | 10.1128/jcm.37.12.4158-4160.1999 | 1999 | classification, classification, classification, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, Genes, rRNA | Phylogeny | |
| 10714998 | Distribution of intervening sequences in the genes for 23S rRNA and rRNA fragmentation among strains of the Salmonella reference collection B (SARB) and SARC sets. | Pabbaraju K, Miller WL, Sanderson KE. | J Bacteriol | 10.1128/jb.182.7.1923-1929.2000 | 2000 | classification, genetics, Escherichia coli Proteins, genetics, Phylogeny, genetics, genetics | Phylogeny | |
| 10747131 | Identification of Campylobacter jejuni, C. coli, C. lari, C. upsaliensis, arcobacter butzleri, and A. butzleri-like species based on the glyA gene. | Al Rashid ST, Dakuna I, Louie H, Ng D, Vandamme P, Johnson W, Chan VL. | J Clin Microbiol | 10.1128/jcm.38.4.1488-1494.2000 | 2000 | classification, classification, genetics, methods | Phylogeny | |
| 10790105 | Helicobacter mesocricetorum sp. nov., A novel Helicobacter isolated from the feces of Syrian hamsters. | Simmons JH, Riley LK, Besch-Williford CL, Franklin CL. | J Clin Microbiol | 10.1128/jcm.38.5.1811-1817.2000 | 2000 | microbiology, classification, Phylogeny | Phylogeny | |
| 10834986 | Misidentifying helicobacters: the Helicobacter cinaedi example. | Vandamme P, Harrington CS, Jalava K, On SL. | J Clin Microbiol | 10.1128/jcm.38.6.2261-2266.2000 | 2000 | classification, Bacterial Typing Techniques | Phylogeny | |
| 11148003 | Emergence of diverse Helicobacter species in the pathogenesis of gastric and enterohepatic diseases. | Solnick JV, Schauer DB. | Clin Microbiol Rev | 10.1128/cmr.14.1.59-97.2001 | 2001 | microbiology, classification, Helicobacter Infections, microbiology, pathology, Disease Models, Animal | Phylogeny | |
| 11283079 | Specific detection and prevalence of Helicobacter heilmannii-like organisms in the human gastric mucosa by fluorescent in situ hybridization and partial 16S ribosomal DNA sequencing. | Trebesius K, Adler K, Vieth M, Stolte M, Haas R. | J Clin Microbiol | 10.1128/jcm.39.4.1510-1516.2001 | 2001 | microbiology, isolation & purification, epidemiology, genetics, In Situ Hybridization, Fluorescence | Enzymology | Phylogeny |
| 11376052 | Coinfection of enteric Helicobacter spp. and Campylobacter spp. in cats. | Shen Z, Feng Y, Dewhirst FE, Fox JG. | J Clin Microbiol | 10.1128/jcm.39.6.2166-2172.2001 | 2001 | classification, classification, veterinary, veterinary, microbiology | Phylogeny | |
| 11471846 | Fatal gastrointestinal infection with 'Flexispira rappini'-like organisms in a cat. | Kipar A, Weber M, Menger S, Harmsen D. | J Vet Med B Infect Dis Vet Public Health | 10.1046/j.1439-0450.2001.00461.x | 2001 | immunology, veterinary, veterinary, microbiology | ||
| 11595979 | Recurrent bacteremia and multifocal lower limb cellulitis due to Helicobacter-like organisms in a patient with X-linked hypogammaglobulinemia. | Gerrard J, Alfredson D, Smith I. | Clin Infect Dis | 10.1086/323405 | 2001 | pathology, classification, microbiology, microbiology, complications | Phylogeny | |
| 11882701 | Influence of activated charcoal, porcine gastric mucin and beta-cyclodextrin on the morphology and growth of intestinal and gastric Helicobacter spp. | Taneera J, Moran AP, Hynes SO, Nilsson HO, Al-Soud WA, Wadstrom T. | Microbiology (Reading) | 10.1099/00221287-148-3-677 | 2002 | microbiology, microbiology, growth & development, ultrastructure | ||
| 12037042 | Captive rhesus monkeys (Macaca mulatta) are commonly infected with Helicobacter cinaedi. | Fernandez KR, Hansen LM, Vandamme P, Beaman BL, Solnick JV. | J Clin Microbiol | 10.1128/jcm.40.6.1908-1912.2002 | 2002 | Animals, Laboratory, Macaca mulatta, classification, isolation & purification, veterinary, microbiology | Phylogeny | Enzymology |
| 12704182 | Glycoconjugate binding of gastric and enterohepatic Helicobacter spp. | Hynes SO, Teneberg S, Roche N, Wadstrom T. | Infect Immun | 10.1128/iai.71.5.2976-2980.2003 | 2003 | microbiology, microbiology, metabolism, metabolism, metabolism | Metabolism | |
| 14500481 | Presence of active aliphatic amidases in Helicobacter species able to colonize the stomach. | Bury-Mone S, Skouloubris S, Dauga C, Thiberge JM, Dailidiene D, Berg DE, Labigne A, De Reuse H. | Infect Immun | 10.1128/iai.71.10.5613-5622.2003 | 2003 | enzymology, pathogenicity, metabolism | Enzymology | Metabolism |
| 15131162 | Longitudinal study of the excretion patterns of thermophilic Campylobacter spp. in young pet dogs in Denmark. | Hald B, Pedersen K, Waino M, Jorgensen JC, Madsen M. | J Clin Microbiol | 10.1128/jcm.42.5.2003-2012.2004 | 2004 | isolation & purification | Enzymology | Phylogeny |
| 15872245 | Significance of transiently positive enzyme-linked immunosorbent assay results in detection of Helicobacter pylori in stool samples from children. | Haggerty TD, Perry S, Sanchez L, Perez-Perez G, Parsonnet J. | J Clin Microbiol | 10.1128/jcm.43.5.2220-2223.2005 | 2005 | microbiology, Helicobacter pylori, diagnosis | ||
| 16825630 | Helicobacter cynogastricus sp. nov., isolated from the canine gastric mucosa. | Van den Bulck K, Decostere A, Baele M, Vandamme P, Mast J, Ducatelle R, Haesebrouck F. | Int J Syst Evol Microbiol | 10.1099/ijs.0.63860-0 | 2006 | microbiology, classification, isolation & purification, microbiology, veterinary, microbiology | Phylogeny | Enzymology |
| 17005753 | First case of bacteremia and multifocal cellulitis due to Helicobacter canis in an immunocompetent patient. | Leemann C, Gambillara E, Prod'hom G, Jaton K, Panizzon R, Bille J, Francioli P, Greub G, Laffitte E, Tarr PE. | J Clin Microbiol | 10.1128/jcm.01453-06 | 2006 | isolation & purification, microbiology, microbiology, microbiology, Immunocompetence | Enzymology | Phylogeny |
| 17079500 | Helicobacter cinaedi cellulitis and bacteremia in immunocompetent hosts after orthopedic surgery. | Kitamura T, Kawamura Y, Ohkusu K, Masaki T, Iwashita H, Sawa T, Fujii S, Okamoto T, Akaike T. | J Clin Microbiol | 10.1128/jcm.01507-06 | 2007 | classification, microbiology, microbiology, adverse effects, Immunocompetence | Phylogeny | |
| 17267952 | Helicobacter equorum sp. nov., a urease-negative Helicobacter species isolated from horse faeces. | Moyaert H, Decostere A, Vandamme P, Debruyne L, Mast J, Baele M, Ceelen L, Ducatelle R, Haesebrouck F. | Int J Syst Evol Microbiol | 10.1099/ijs.0.64279-0 | 2007 | microbiology, microbiology, classification, isolation & purification | Phylogeny | Enzymology |
| 17567285 | Helicobacter canis bacteraemia in a 7-month-old child. | Prag J, Blom J, Krogfelt KA. | FEMS Immunol Med Microbiol | 10.1111/j.1574-695x.2007.00271.x | 2007 | classification, microbiology, microbiology | Phylogeny | |
| 19088908 | A Case of Helicobacter cinaedi Bacteraemia in a Previously Healthy Person with Cellulitis. | Holst H, Andresen K, Blom J, Hojlyng N, Kemp M, Krogfelt KA, Christensen JJ. | Open Microbiol J | 10.2174/1874285800802010029 | 2008 | Infection, PCR, Heterosexual, Helicobacter Cinaedi, Xtra-intestinal Setting | ||
| 19756417 | Persistent Helicobacter canis bacteremia in a patient with gastric lymphoma. | Alon D, Paitan Y, Ben-Nissan Y, Chowers M. | Infection | 10.1007/s15010-009-9067-6 | 2010 | isolation & purification, diagnosis, diagnosis, microbiology, complications, complications | Enzymology | Phylogeny |
| 20479300 | Pyoderma gangrenosum-like ulcer in a patient with X-linked agammaglobulinemia: identification of Helicobacter bilis by mass spectrometry analysis. | Murray PR, Jain A, Uzel G, Ranken R, Ivy C, Blyn LB, Ecker DJ, Sampath R, Lee CC, Turner ML. | Arch Dermatol | 10.1001/archdermatol.2010.86 | 2010 | isolation & purification, diagnosis, complications, diagnosis | Enzymology | Phylogeny |
| 20616187 | Experimental Helicobacter marmotae infection in A/J mice causes enterohepatic disease. | Patterson MM, Rogers AB, Fox JG. | J Med Microbiol | 10.1099/jmm.0.020479-0 | 2010 | pathogenicity, veterinary, veterinary, pathology, Disease Models, Animal | ||
| 20955468 | Could Helicobacter organisms cause inflammatory bowel disease? | Hansen R, Thomson JM, Fox JG, El-Omar EM, Hold GL. | FEMS Immunol Med Microbiol | 10.1111/j.1574-695x.2010.00744.x | 2011 | physiology, pathology, microbiology | ||
| 21278267 | Campylobacter troglodytis sp. nov., isolated from feces of human-habituated wild chimpanzees (Pan troglodytes schweinfurthii) in Tanzania. | Kaur T, Singh J, Huffman MA, Petrzelkova KJ, Taylor NS, Xu S, Dewhirst FE, Paster BJ, Debruyne L, Vandamme P, Fox JG. | Appl Environ Microbiol | 10.1128/aem.01840-09 | 2011 | microbiology, microbiology, classification, isolation & purification | Phylogeny | Enzymology |
| 21546560 | Helicobacter marmotae and novel Helicobacter and Campylobacter species isolated from the livers and intestines of prairie dogs. | Beisele M, Shen Z, Parry N, Mobley M, Taylor NS, Buckley E, Abedin MZ, Dewhirst FE, Fox JG. | J Med Microbiol | 10.1099/jmm.0.032144-0 | 2011 | microbiology, microbiology, microbiology, isolation & purification, isolation & purification, veterinary, veterinary | Enzymology | Phylogeny |
| 21600037 | Rapid identification and quantification of Campylobacter coli and Campylobacter jejuni by real-time PCR in pure cultures and in complex samples. | Leblanc-Maridor M, Beaudeau F, Seegers H, Denis M, Belloc C. | BMC Microbiol | 10.1186/1471-2180-11-113 | 2011 | classification, isolation & purification, classification, isolation & purification, methods, methods | Phylogeny | Enzymology |
| 22073125 | A comprehensive evaluation of colonic mucosal isolates of Sutterella wadsworthensis from inflammatory bowel disease. | Mukhopadhya I, Hansen R, Nicholl CE, Alhaidan YA, Thomson JM, Berry SH, Pattinson C, Stead DA, Russell RK, El-Omar EM, Hold GL. | PLoS One | 10.1371/journal.pone.0027076 | 2011 | microbiology, microbiology, isolation & purification, microbiology, microbiology, microbiology | Enzymology | Phylogeny |
| 22184416 | Alkyl hydroperoxide reductase is required for Helicobacter cinaedi intestinal colonization and survival under oxidative stress in BALB/c and BALB/c interleukin-10-/- mice. | Charoenlap N, Shen Z, McBee ME, Muthupalani S, Wogan GN, Fox JG, Schauer DB. | Infect Immun | 10.1128/iai.05477-11 | 2012 | pathogenicity, microbiology, metabolism, metabolism, immunology, Oxidative Stress, Microbial Viability, Stress, Physiological | Metabolism | |
| 22683393 | Helicobacter spp. in the saliva, stomach, duodenum and faeces of colony dogs. | Ekman E, Fredriksson M, Trowald-Wigh G. | Vet J | 10.1016/j.tvjl.2012.05.001 | 2013 | microbiology, microbiology, classification, isolation & purification, microbiology, microbiology | Phylogeny | Enzymology |
| 23284025 | Helicobacter canis bacteremia in a patient with fever of unknown origin. | Abidi MZ, Abidi MZ, Wilhelm MP, Neff JL, Hughes JG, Cunningham SA, Patel R. | J Clin Microbiol | 10.1128/jcm.02548-12 | 2013 | isolation & purification, diagnosis, diagnosis, etiology | Enzymology | Phylogeny |
| 24011248 | Gastric and enterohepatic non-Helicobacter pylori Helicobacters. | Flahou B, Haesebrouck F, Smet A, Yonezawa H, Osaki T, Kamiya S. | Helicobacter | 10.1111/hel.12072 | 2013 | Human disease, Pathogenesis, Genomics, Enterohepatic Non-h. Pylori Helicobacter Spp., Gastric Non-h. Pylori Helicobacter Spp., Animal Disease, physiology, microbiology, microbiology | Genetics | |
| 24153128 | Rapid identification and subtyping of Helicobacter cinaedi strains by intact-cell mass spectrometry profiling with the use of matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Taniguchi T, Sekiya A, Higa M, Saeki Y, Umeki K, Okayama A, Hayashi T, Misawa N. | J Clin Microbiol | 10.1128/jcm.01798-13 | 2014 | isolation & purification, chemistry, diagnosis, veterinary, methods, methods | Enzymology | Phylogeny |
| 24188726 | Helicobacter canis colonization in sheep: a Zoonotic link. | Swennes AG, Turk ML, Trowel EM, Cullin C, Shen Z, Pang J, Petersson KH, Dewhirst FE, Fox JG. | Helicobacter | 10.1111/hel.12097 | 2014 | Helicobacter infections, Zoonoses, Sheep Diseases, microbiology, isolation & purification, veterinary, microbiology, microbiology | Enzymology | Phylogeny |
| 24372779 | Helicobacter canis bacteremia in a renal transplant patient. | van der Vusse ML, van Son WJ, Ott A, Manson W. | Transpl Infect Dis | 10.1111/tid.12174 | 2014 | Treatment, Immunocompromised host, bacteremia, Kidney Transplant, Helicobacter Canis, genetics, immunology, immunology, analysis, therapeutic use, Kidney Transplantation, prevention & control, Immunocompromised Host | Pathogenicity | |
| 24452175 | Detection of Campylobacter in stool and determination of significance by culture, enzyme immunoassay, and PCR in developing countries. | Platts-Mills JA, Liu J, Gratz J, Mduma E, Amour C, Swai N, Taniuchi M, Begum S, Penataro Yori P, Tilley DH, Lee G, Shen Z, Whary MT, Fox JG, McGrath M, Kosek M, Haque R, Houpt ER. | J Clin Microbiol | 10.1128/jcm.02935-13 | 2014 | microbiology, classification, isolation & purification, diagnosis, diagnosis, methods, methods | Phylogeny | Enzymology |
| 24995041 | Role of Campylobacter jejuni gamma-glutamyl transpeptidase on epithelial cell apoptosis and lymphocyte proliferation. | Floch P, Pey V, Castroviejo M, Dupuy JW, Bonneu M, de la Guardia AH, Pitard V, Megraud F, Lehours P. | Gut Pathog | 10.1186/1757-4749-6-20 | 2014 | Lymphocytes, Campylobacter jejuni, Epithelial cells, Ggt | ||
| 25736414 | Helicobacter himalayensis sp. nov. isolated from gastric mucosa of Marmota himalayana. | Hu S, Jin D, Lu S, Liu S, Zhang J, Wang Y, Bai X, Xiong Y, Huang Y, Xu H, Wang Y, Du X, Ye C, Hanninen ML, Xu J. | Int J Syst Evol Microbiol | 10.1099/ijs.0.000163 | 2015 | microbiology, microbiology, classification, Phylogeny | Phylogeny | |
| 26839246 | Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea. | Bik EM, Costello EK, Switzer AD, Callahan BJ, Holmes SP, Wells RS, Carlin KP, Jensen ED, Venn-Watson S, Relman DA. | Nat Commun | 10.1038/ncomms10516 | 2016 | microbiology, microbiology, microbiology, genetics, microbiology, microbiology, genetics | ||
| 27175206 | Identification of Helicobacter spp. in gastrointestinal tract, pancreas and hepatobiliary system of stray cats. | Shojaee Tabrizi A, Derakhshandeh A, Esfandiari A, Ali Atashi Z. | Iran J Vet Res | 2015 | PCR, Gastrointestinal tract, Helicobacter, cat | |||
| 27275113 | Diagnosis of Genus Helicobacter through a hemi-nested PCR assay of 16S rRNA. | Qin H, Tang G, Yi P, Pan X, Huang H, Chang R, Shi Z, Ashraf MA. | Saudi Pharm J | 10.1016/j.jsps.2016.04.015 | 2016 | 16S rRNA, Helicobacter, Hemi-nested Pcr Assay | Phylogeny | |
| 27529744 | Evidence of Zoonotic Transmission of Helicobacter canis Between Sheep and Human Contacts. | Sabry MA, Abdel-Moein KA, Seleem A. | Vector Borne Zoonotic Dis | 10.1089/vbz.2016.1994 | 2016 | Sheep, Reservoir, Zoonosis, Helicobacter Canis, classification, veterinary, microbiology | Phylogeny | |
| 28694295 | In Vivo Analysis of the Viable Microbiota and Helicobacter pylori Transcriptome in Gastric Infection and Early Stages of Carcinogenesis. | Thorell K, Bengtsson-Palme J, Liu OH, Palacios Gonzales RV, Nookaew I, Rabeneck L, Paszat L, Graham DY, Nielsen J, Lundin SB, Sjoling A. | Infect Immun | 10.1128/iai.00031-17 | 2017 | Helicobacter Pylori, atrophic gastritis, Gastric Carcinogenesis, Metatranscriptomics, Stomach Microbiota, microbiology, genetics, microbiology, microbiology, Transcriptome, Carcinogenesis, Gastrointestinal Microbiome | Transcriptome | |
| 29255610 | Helicobacter canis bacteraemia and cellulitis in a patient with end-stage renal disease. | Shakir SM, Powers-Fletcher MV, Slechta ES, Fisher MA. | JMM Case Rep | 10.1099/jmmcr.0.005126 | 2017 | Zoonosis, Cellulitis, Bacteraemia, 16s Rrna Sequencing, Intervening Sequence, Underlying Disease, Helicobacter Canis | Phylogeny | |
| 29326675 | A Potential New Human Pathogen Belonging to Helicobacter Genus, Identified in a Bloodstream Infection. | van der Mee-Marquet NL, Benejat L, Diene SM, Lemaignen A, Gaia N, Smet A, Haesebrouck F, Cherkaoui A, Ducournau A, Lacomme S, Gontier E, Bernard L, Megraud F, Goudeau A, Lehours P, Francois P. | Front Microbiol | 10.3389/fmicb.2017.02533 | 2017 | Electron microscopy, Phylogeny, Genome Content, Human Infection, Helicobacter Sp. | Phylogeny | Genetics |
| 30174504 | Helicobacter pylori in a poultry slaughterhouse: Prevalence, genotyping and antibiotic resistance pattern. | Hamada M, Elbehiry A, Marzouk E, Moussa IM, Hessain AM, Alhaji JH, Heme HA, Zahran R, Abdeen E. | Saudi J Biol Sci | 10.1016/j.sjbs.2018.02.002 | 2018 | Helicobacter Pylori, Chickens, Virulence genes, Antibiotic Resistance, Egypt | ||
| 30499209 | Hepatic leptospiral infections in dogs without obvious renal involvement. | McCallum KE, Constantino-Casas F, Cullen JM, Warland JH, Swales H, Linghley N, Kortum AJ, Sterritt AJ, Cogan T, Watson PJ. | J Vet Intern Med | 10.1111/jvim.15340 | 2019 | Leptospira, Hepatitis, Dog, United Kingdom, Leptospira, veterinary, veterinary, microbiology | ||
| 32355355 | Unusual case of pyogranulomatous hepatitis of suspected infectious etiology in a 3-year-old Labrador retriever dog. | Ladak M. | Can Vet J | 2020 | complications, diagnosis, veterinary, veterinary, veterinary, Hepatitis, diagnosis | |||
| 32730134 | Dysbiosis in a canine model of human fistulizing Crohn's disease. | Maldonado-Contreras A, Ferrer L, Cawley C, Crain S, Bhattarai S, Toscano J, Ward DV, Hoffman A. | Gut Microbes | 10.1080/19490976.2020.1785246 | 2020 | Dysbiosis, Microbiome, Perianal Fistulas, Canine Furunculosis, microbiology, microbiology, Disease Models, Animal, microbiology | ||
| 32848306 | Structure of cytotoxic associated antigen A protein of Helicobacter pylori from Bali and Lombok isolates of Indonesia. | Suharsono H, Wibawa DN, Muttaqin Z, Agustina KK. | Vet World | 10.14202/vetworld.2020.1319-1326 | 2020 | Helicobacter Pylori, Structure, Virulence, Bali, Lombok, Cytotoxic Associated Antigen A | ||
| 33827581 | Helicobacter canis bacteraemia in a rheumatoid arthritis patient treated with tofacitinib: case report and literature review. | Mihevc M, Koren Krajnc M, Bombek Ihan M, Holc I. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-021-00426-x | 2021 | Rheumatoid arthritis, Treatment, Zoonosis, Immunocompromised, Hypogammaglobulinemia, Tofacitinib, Helicobacter Canis, drug effects, drug therapy, drug therapy, therapeutic use, therapeutic use | Pathogenicity | |
| 35152551 | An exploratory study on the presence of Helicobacter heilmannii and Helicobacter billis in the feces of companion dogs. | Fatemi Khader M, Pourmahdi Borujeni M, Moori Bakhtiari N, Avizeh R. | Vet Med Sci | 10.1002/vms3.765 | 2022 | Helicobacter Pylori, PCR, epidemiology, Zoonotic, Companion Dogs, Helicobacter Spp, Helicobacter, Helicobacter heilmannii, Helicobacter pylori, Helicobacter Infections, Dog Diseases | ||
| 35281304 | Helicobacter canis: A Review of Microbiological and Clinical Features. | Lardinois B, Belkhir L, Verroken A. | Front Microbiol | 10.3389/fmicb.2021.814944 | 2021 | Bacteriology, bacteremia, Clinical features, Susceptibility Testing, Mini-review, Helicobacter Canis | ||
| 35965387 | Effects of a mildly cooked human-grade dog diet on gene expression, skin and coat health measures, and fecal microbiota of healthy adult dogs. | Geary EL, Oba PM, Applegate CC, Clark LV, Fields CJ, Swanson KS. | J Anim Sci | 10.1093/jas/skac265 | 2022 | Fecal Microbiome, Canine Nutrition, Skin And Coat Health, Dogs, Digestion, Animal Feed, Gastrointestinal Microbiome | ||
| 35983246 | Helicobacter bilis Contributes to the Occurrence of Inflammatory Bowel Disease by Inducing Host Immune Disorders. | Peng W, Zhao X, Li X. | Biomed Res Int | 10.1155/2022/1837850 | 2022 | Helicobacter, Helicobacter Infections, Inflammatory Bowel Diseases, Immune System Diseases | ||
| 36204686 | Pet-related bacterial zoonotic infections: Three cases of severe infections in the immunocompromised host. | van Wezel EM, van der Beek ESJ, Siebrecht MAN, Stel AJ, Wouthuyzen-Bakker M, Meessen NEL. | IDCases | 10.1016/j.idcr.2022.e01623 | 2022 | Pasteurella multocida, Zoonosis, Helicobacter Canis, Capnocytophaga Canimorsus, Pet-Related Infection | ||
| 37239366 | Helicobacter pylori Strains Isolated from Raw Poultry Meat in the Shahrekord Region, Iran: Frequency and Molecular Characteristics. | Asadi S, Rahimi E, Shakerian A. | Genes (Basel) | 10.3390/genes14051006 | 2023 | Helicobacter Pylori, Genotyping, Antibiotic Resistance, Raw Poultry Flesh, Helicobacter pylori, Helicobacter Infections | ||
| 37430109 | Helicobacter pylori strains isolated from raw poultry meat: frequency and molecular characteristics. | Piri-Gharaghie T, Ghajari G, Tolou-Shikhzadeh-Yazdi S, Aghassizadeh-Sherbaf M, Khorsand-Dehkordi S. | Sci Rep | 10.1038/s41598-023-38374-5 | 2023 | Poultry, Helicobacter pylori | ||
| 37430367 | Metagenomic next-generation sequencing for rapid detection of pulmonary infection in patients with acquired immunodeficiency syndrome. | Zhong J, Liu Y, Luo N, Wei Q, Su Q, Zou J, Wu X, Huang X, Jiang Y, Liang L, Li H, Lin J. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-023-00608-9 | 2023 | Acquired immunodeficiency syndrome, Diagnosis, Pulmonary infection, Metagenomic Next-generation Sequencing, Acquired Immunodeficiency Syndrome, Pneumonia | ||
| 37823030 | Helicobacter zhangjianzhongii sp. nov., isolated from dog feces. | Wang H, Gu Y, Zhou G, Chen X, Zhang X, Shao Z, Zhang M. | Front Genet | 10.3389/fgene.2023.1240581 | 2023 | Genomic characteristics, phylogenetic analyses, Antimicrobial Susceptibility, Novel Species, Helicobacter Zhangjianzhongii | ||
| 38009997 | Characterization of HcaA, a novel autotransporter protein in Helicobacter cinaedi, and its role in host cell adhesion. | Aoki S, Mori S, Matsui H, Shibayama K, Kenri T, Rimbara E. | mSphere | 10.1128/msphere.00403-23 | 2023 | Cell adhesion, Helicobacter Cinaedi, Type V Secretion System, Non-helicobacter Pylori Helicobacter Species, Autotransporter Protein, Helicobacter, Helicobacter Infections, Cell Adhesion, Type V Secretion Systems | ||
| 38700283 | Bibliometric analysis and evaluation of publications on non-Helicobacter pylori helicobacters from 1993 to 2023. | Wang M, Fang H, Zhou C, Ouyang Y, Yu C, Zhang Y, Zhu X, Xie C, Deng Q. | Future Microbiol | 10.2217/fmb-2024-0034 | 2024 | Publications, Bibliometric Analysis, Research Trends, Citespace, Non-helicobacter Pylori Helicobacter, Helicobacter, Helicobacter Infections, Bibliometrics | ||
| 39005237 | Metabarcoding using nanopore sequencing enables identification of diverse and zoonotic vector-borne pathogens from neglected regions: A case study investigating dogs from Bhutan. | Huggins LG, Namgyel U, Wangchuk P, Atapattu U, Traub R, Colella V. | One Health | 10.1016/j.onehlt.2024.100839 | 2024 | Zoonosis, Bartonella, Next-generation Sequencing, Ehrlichia, One Health, Minion, Setaria Tundra, Dirofilaria Sp. Hongkongensis | ||
| 39012105 | Meta-transcriptomic analysis of companion animal infectomes reveals their diversity and potential roles in animal and human disease. | Wu W-C, Pan Y-F, Zhou W-D, Liao Y-Q, Peng M-W, Luo G-Y, Xin G-Y, Peng Y-N, An T, Li B, Luo H, Barrs VR, Beatty JA, Holmes EC, Zhao W, Shi M, Shu Y. | mSphere | 10.1128/msphere.00439-24 | 2024 | Veterinary medicine, Zoonoses, Metagenomics, Microbiome, Virome, Bacteria, Zoonoses, Cat Diseases, Dog Diseases, Pets | Genetics | |
| 39196875 | Metabarcoding study of potential pathogens and zoonotic risks associated with dog feces in Seoul, South Korea. | Liyanagama I, Oh S, Choi JH, Yi MH, Kim M, Yun S, Kang D, Kim SL, Ojeda Ayala MG, Odua F, Yong TS, Kim JY. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0012441 | 2024 | Feces, Zoonoses, Dog Diseases, Pets, DNA Barcoding, Taxonomic | ||
| 39267933 | Prevalence and diversity of enteric Helicobacter spp. in healthy and diarrheic cats. | Ahmadi R, Arfaee F, Jamshidi S, Mortazavi P, Jamshidian M. | Iran J Microbiol | 10.18502/ijm.v16i4.16317 | 2024 | Feces, Cats, Helicobacter Spp., Diarrhea Healthy | ||
| 39394961 | Comprehensive profile of the companion animal gut microbiome integrating reference-based and reference-free methods. | Branck T, Hu Z, Nickols WA, Walsh AM, Bhosle A, Short MI, Nearing JT, Asnicar F, McIver LJ, Maharjan S, Rahnavard A, Louyakis AS, Badri DV, Brockel C, Thompson KN, Huttenhower C. | ISME J | 10.1093/ismejo/wrae201 | 2024 | Metagenomics, Microbial Evolution, Host Adaptation, Gut Microbiome, Companion Animals, Metagenomic Assembly, Feces, Phylogeny, Metagenome, Metagenomics, Pets, Gastrointestinal Microbiome | Genetics | Phylogeny |
| 39682365 | Computed Tomographic Findings in Dogs with Hepatic Bacterial Parenchymal Infection and Abscessation. | Mate de Haro L, Vila A, Di Bella A, Mallol C, Anselmi C, Barreiro-Vazquez JD, Pollard D, Salguero R, Fitzgerald E, Moreno-Aguado B. | Animals (Basel) | 10.3390/ani14233399 | 2024 | Canine, Liver Abscess, computed tomography, Bacterial Liver Infection | ||
| 39860994 | Pathogen Detection and Resistome Analysis in Healthy Shelter Dogs Using Whole Metagenome Sequencing. | Shringi S, Shah DH, Carney K, Verma A. | Pathogens | 10.3390/pathogens14010033 | 2025 | Pathogen, Antimicrobial resistance, Metagenomics, Shelter Dogs, Bacteria, Dog Diseases, Drug Resistance, Microbial, Metagenome | Genetics | |
| 39934478 | The first two human infections with Helicobacter zhangjianzhongii, a new Helicobacter closely related to Helicobacter canis. | Wandji S, Jehanne Q, Benejat L, Ducournau A, Aptel J, Levast M, Jauvain M, Lehours P. | Eur J Clin Microbiol Infect Dis | 10.1007/s10096-025-05045-4 | 2025 | New species, Helicobacter, MALDI-TOF, Zoonosis, Ngs, Helicobacter, Bacteremia, Helicobacter Infections | ||
| 40613344 | Metabarcoding Study of Fecal Bacterial and Eukaryotic Pathogens in Stray and Pet Cats in Seoul, South Korea, 2022. | Ayala MGO, Oh S, Choi JH, Yi MH, Kim M, Kang D, Kim SL, Odua F, Liyanagama I, Kim JY. | Public Health Rep | 10.1177/00333549251342745 | 2025 | pathogens, Feline, Cats, Zoonotic Diseases, Metabarcoding, Feces, Bacteria, Pets, DNA Barcoding, Taxonomic | ||
| 40901542 | Pet and Stray Dogs' Contribution to Zoonotic Transmission Pathways: A Bibliometric Review. | Langlois T, Hurtrez-Bousses S, de Garine-Wichatitsky M. | Transbound Emerg Dis | 10.1155/tbed/5522451 | 2025 | Bibliometric Analysis, One Health, Zoonotic Pathogens, Transmission Pathways, Canine Ecotypes, Zoonoses, Dog Diseases, Pets |
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 41290 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104753 | Collection of Institut Pasteur (CIP 104753) | |
| 51162 | Curators of the CCUG | https://www.ccug.se/strain?id=32756 | Culture Collection University of Gothenburg (CCUG) (CCUG 32756) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 68373 | Automatically annotated from API CAM | |||
| 68382 | Automatically annotated from API zym | |||
| 124043 | Isabel Schober, Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy | ||
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG | |
| 126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer | StrainInfo—the central database for linked microbial strain identifiers | 10.1093/database/baaf059 |
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