Cite the latest
BacDive paper
×

Rate our new design

Thank you!
BacDive ID 140003
Type strain
Strain Designation H1
Culture col. no. DSM 26132 H1
NCBI tax ID(s) 1486246
Links
version 10 (current version)

General

@ref: 42611

BacDive-ID: 140003

DSM-Number: 26132

keywords: 16S sequence, mesophilic

description: Halomonas sp. H1 is a mesophilic prokaryote that was isolated from sediment.

NCBI tax id

  • NCBI tax id: 1486246
  • Matching level: species

strain history

  • @ref: 42611
  • history: <- D. Zhu, Jiangsu Univ., Zhenjiang, People's Republic of China; H1

doi: 10.13145/bacdive140003.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Oceanospirillales
  • family: Halomonadaceae
  • genus: Halomonas
  • species: Halomonas sp.
  • full scientific name: Halomonas Vreeland et al. 1980
  • synonyms

    @refsynonym
    20215Litchfieldella
    20215Bisbaumannia
    20215Onishia
    20215Volcaniella
    20215Franzmannia
    20215Billgrantia
    20215Vreelandella
    20215Deleya

@ref: 42611

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Oceanospirillales

family: Halomonadaceae

genus: Halomonas

species: Halomonas sp.

full scientific name: Halomonas sp.

strain designation: H1

type strain: no

Culture and growth conditions

culture medium

  • @ref: 42611
  • name: MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514b
  • composition: Name: MEDIUM 514 plus additional salt (DSMZ Medium 514b; with strain-specific modifications) Composition: NaCl 30.0 g/l Agar 17.5 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 42611
  • growth: positive
  • type: growth
  • temperature: 28

Isolation, sampling and environmental information

isolation

  • @ref: 42611
  • sample type: sediment
  • geographic location: South China Sea
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Sediment
#Environmental#Terrestrial#Sediment

taxonmaps

  • @ref: 69479
  • File name: preview.99_62636.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_48;96_2666;97_9055;98_11107;99_62636&stattab=map
  • Last taxonomy: Halomonas
  • 16S sequence: JQ044787
  • Sequence Identity:
  • Total samples: 19
  • soil counts: 14
  • aquatic counts: 4
  • animal counts: 1

Sequence information

16S sequences

  • @ref: 42611
  • description: Halomonas sp. H1(2012) 16S ribosomal RNA gene, partial sequence
  • accession: JQ044787
  • length: 1438
  • database: nuccore
  • NCBI tax ID: 1134412

Literature

@ref: 42611

culture collection no.: DSM 26132

straininfo link

  • @ref: 126262
  • straininfo: 402399

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42611Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-26132Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26132)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059