@ref: 47196
BacDive-ID: 143644
keywords: genome sequence, 16S sequence
description: Campylobacter majalis CCUG 20705 is a prokaryote that was isolated from Pig intestine.
| NCBI tax id | Matching level |
|---|---|
| 205 | species |
| 2790656 | species |
doi: 10.13145/bacdive143644.20251217.10
@ref: 47196
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Campylobacteraceae
genus: Campylobacter
species: Campylobacter sp.
type strain: no
| @ref | gram stain | confidence |
|---|---|---|
| 125439 | negative | 99.6 |
| 125438 | negative | 97.294 |
| @ref | spore formation | confidence |
|---|---|---|
| 125439 | no | 99.4 |
| 125438 | no | 92.598 |
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68373 | 16199 | urea | - | hydrolysis |
| 68373 | 606565 | hippurate | - | hydrolysis |
| 68373 | 78019 | triphenyltetrazolium chloride | - | reduction |
| 68373 | 17634 | D-glucose | - | assimilation |
| 68373 | 30031 | succinate | - | assimilation |
| 68373 | 17272 | propionate | - | assimilation |
| 68373 | 25115 | malate | - | assimilation |
| 68373 | 16947 | citrate | - | assimilation |
| @ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. |
|---|---|---|---|---|---|
| 68373 | 474053 | cefazolin | yes | yes | 224 µg |
| 68373 | 48923 | erythromycin | yes | yes | 14 µg |
| 68373 | 100147 | nalidixic acid | yes | yes | 84 µg |
| @ref | value | activity | ec |
|---|---|---|---|
| 68373 | alkaline phosphatase | - | 3.1.3.1 |
| 68373 | L-aspartate arylamidase | - | 3.4.11.21 |
| 68373 | L-arginine arylamidase | - | |
| 68373 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68373 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 68373 | urease | - | 3.5.1.5 |
| @ref | fatty acid | percentage | ECL |
|---|---|---|---|
| 47196 | C12:0 | 5.2 | 12 |
| 47196 | C13:0 | 0.6 | 13 |
| 47196 | C14:0 | 15.1 | 14 |
| 47196 | C15:0 | 1 | 15 |
| 47196 | C16:0 | 24.3 | 16 |
| 47196 | C12:0 ALDE ? | 1.4 | 10.915 |
| 47196 | C13:0 ISO 2OH | 0.6 | 13.814 |
| 47196 | C13:1 at 12-13 | 1.8 | 12.931 |
| 47196 | C14:0 3OH/C16:1 ISO I | 4 | 15.485 |
| 47196 | C16:0 3OH | 2.3 | 17.52 |
| 47196 | C16:1 ω7c | 20.6 | 15.819 |
| 47196 | C17:0 CYCLO | 0.9 | 16.888 |
| 47196 | C18:1 ω7c /12t/9t | 20.4 | 17.824 |
| 47196 | C18:2 ω6,9c/C18:0 ANTE | 1.9 | 17.724 |
| @ref | URE | NIT | EST | HIP | GGT | TTC | PYRA | ArgA | AspA | PAL | H2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | ERO | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47196 | - | + | + | - | - | - | - | - | - | - | + | - | - | - | - | + | - | - | - | - | - |
| 47196 | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | + |
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Suidae (Pig,Swine) |
| #Host Body-Site | #Gastrointestinal tract |
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.294 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 60.644 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 92.598 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 87.685 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 89.893 | no |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | yes | 58.562 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 99.4 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | no | 64.9 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | negative | 99.6 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | facultative aerobe | 60.6 |
@ref: 47196
culture collection no.: CCUG 20705, LMG 7974
| Pubmed-ID | title | authors | journal | DOI | year | mesh |
|---|---|---|---|---|---|---|
| 36748456 | Campylobacter majalis sp. nov. and Campylobacter suis sp. nov., novel Campylobacter species isolated from porcine gastrointestinal mucosa. | Lynch C, Peeters C, Walsh N, McCarthy C, Coffey A, Lucey B, Vandamme P. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005510 | 2022 | Porcine, Campylobacter, Novel Species, Orthoaniu, Campylobacter, Fatty Acids |
| 37889054 | Update on novel validly published taxa of bacteria isolated from domestic animals described in 2022. | Lawhon SD, Burbick CR, Munson E, Thelen E, Zapp A, Wilson A. | J Clin Microbiol | 10.1128/jcm.00839-23 | 2023 | Taxonomy, Nomenclature, Veterinary Organisms, Animals, Domestic, Chickens |
| 40243366 | Characterization of proteins present in the biofilm matrix and outer membrane vesicles of Histophilus somni during iron-sufficient and iron-restricted growth: identification of potential protective antigens through in silico analyses. | Lee Y-J, Abdullah M, Chang Y-F, Sudani HA, Inzana TJ. | mBio | 10.1128/mbio.00644-25 | 2025 | protective antigen, Outer Membrane Vesicles, Reverse Vaccinology, Iron Acquisition, Histophilus Somni, Biofilm Matrix, Biofilms, Pasteurellaceae, Iron, Bacterial Proteins, Bacterial Outer Membrane Proteins, Antigens, Bacterial |
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 47196 | Curators of the CCUG | https://www.ccug.se/strain?id=20705 | Culture Collection University of Gothenburg (CCUG) (CCUG 20705) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 68373 | Automatically annotated from API CAM | |||
| 124043 | Isabel Schober, Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy | ||
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG | |
| 126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer | StrainInfo—the central database for linked microbial strain identifiers | 10.1093/database/baaf059 |
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