Cite the latest
BacDive paper
×

Rate our new design

Thank you!
BacDive ID 14387
Type strain
Strain Designation M-1
Culture col. no. DSM 2310 ATCC 23493 NCIB 10270 M-1 NCIMB 10270 IAM 12322 JCM 2514 CIP 104422 3 more
NCBI tax ID(s) 33018
Links
version 9.2 (current version)

General

@ref: 1038

BacDive-ID: 14387

DSM-Number: 2310

keywords: 16S sequence, Bacteria, facultative anaerobe, spore-forming, mesophilic, Gram-positive, motile, rod-shaped, lactate production

description: Sporolactobacillus laevolacticus M-1 is a facultative anaerobe, spore-forming, mesophilic bacterium that produces lactate and was isolated from rhizosphere of Trifolium repens.

NCBI tax id

  • NCBI tax id: 33018
  • Matching level: species

strain history

@refhistory
1038<- NCIB <- O. Nakayama, M-1
67770IAM 12322 <-- O. Nakayama M-1.
120547CIP <- 1995, JCM <- IAM <- O. Nakamaya: strain M-1

doi: 10.13145/bacdive14387.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Sporolactobacillaceae
  • genus: Sporolactobacillus
  • species: Sporolactobacillus laevolacticus
  • full scientific name: Sporolactobacillus laevolacticus (Andersch et al. 1994 ex Nakayama and Yanoshi 1967) Hatayama et al. 2006
  • synonyms

    • @ref: 20215
    • synonym: Bacillus laevolacticus

@ref: 1038

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Sporolactobacillaceae

genus: Sporolactobacillus

species: Sporolactobacillus laevolacticus

full scientific name: Sporolactobacillus laevolacticus (Andersch et al. 1994) Hatayama et al. 2006

strain designation: M-1

type strain: no

Morphology

cell morphology

  • @ref: 120547
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
37933MEDIUM 41- for Lactobacillus, Leuconostoc, Weissella, Pediococcus, Sporolactobacillus inulinusyesDistilled water make up to (1000.000 ml);Man Rogosa Sharp broth (55.000 g)
1038BACILLUS "RACEMILACTICUS" MEDIUM (DSMZ Medium 8)yesName: BACILLUS "RACEMILACTICUS" MEDIUM (DSMZ Medium 8) Composition: Agar 15.0 g/l CaCO3 5.0 g/l Yeast extract 5.0 g/l Peptone 5.0 g/l Glucose 5.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/8
1038R2A MEDIUM (DSMZ Medium 830)yesName: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled waterhttps://mediadive.dsmz.de/medium/830
120547CIP Medium 41yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=41

culture temp

@refgrowthtypetemperature
1038positivegrowth30
37933positivegrowth30
67770positivegrowth30
120547positivegrowth30-37
120547nogrowth10
120547nogrowth15
120547nogrowth45
120547nogrowth55

Physiology and metabolism

oxygen tolerance

  • @ref: 120547
  • oxygen tolerance: facultative anaerobe

spore formation

  • @ref: 120547
  • spore formation: yes

compound production

  • @ref: 1038
  • compound: D(-) lactic acid

halophily

@refsaltgrowthtested relationconcentration
120547NaClpositivegrowth0-2 %
120547NaClnogrowth4 %
120547NaClnogrowth6 %
120547NaClnogrowth8 %
120547NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
12054716947citrate-carbon source
12054717632nitrate-reduction
12054716301nitrite-reduction
12054717632nitrate+respiration
68371Potassium 5-ketogluconate-builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose+builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose+builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837116634raffinose+builds acid from
683716731melezitose+builds acid from
6837115443inulin+builds acid from
6837127082trehalose-builds acid from
6837117992sucrose+builds acid from
6837128053melibiose+builds acid from
6837117306maltose+builds acid from
6837117057cellobiose-builds acid from
6837117814salicin-builds acid from
683714853esculin-builds acid from
6837159640N-acetylglucosamine+builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose+builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from

metabolite production

  • @ref: 120547
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase-3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-galactosidase+3.2.1.23
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382alkaline phosphatase+3.1.3.1
120547oxidase-
120547alcohol dehydrogenase-1.1.1.1
120547gelatinase-
120547amylase+
120547DNase-
120547caseinase+3.4.21.50
120547catalase+1.11.1.6
120547lecithinase-
120547lysine decarboxylase-4.1.1.18
120547ornithine decarboxylase-4.1.1.17
120547urease-3.5.1.5
68382alpha-fucosidase-3.2.1.51
68382alpha-galactosidase+3.2.1.22
68382alpha-chymotrypsin-3.4.21.1

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
120547-++-------++++---+--

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
120547---------+++++---+---+-----++/-++-++++/-+/---+-+-------

Isolation, sampling and environmental information

isolation

@refsample typehost speciesgeographic locationcountryorigin.countrycontinent
1038rhizosphere of Trifolium repensTrifolium repensKofuJapanJPNAsia
67770Rhizosphere of clover (Trifolium repens)Trifolium repens
120547Environment, Rhizosphere of clover, Trifolium repens

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Rhizosphere

taxonmaps

  • @ref: 69479
  • File name: preview.99_7487.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_414;96_3495;97_4284;98_5485;99_7487&stattab=map
  • Last taxonomy: Sporolactobacillus
  • 16S sequence: D16269
  • Sequence Identity:
  • Total samples: 1822
  • soil counts: 181
  • aquatic counts: 140
  • animal counts: 1421
  • plant counts: 80

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
10381Risk group (German classification)
1205471Risk group (French classification)

Sequence information

16S sequences

  • @ref: 67770
  • description: Sporolactobacillus laevolacticus gene for 16S rRNA, strain: IAM 12322
  • accession: D16269
  • length: 1484
  • database: nuccore
  • NCBI tax ID: 33018

GC content

@refGC-contentmethod
103836.7
6777043.5thermal denaturation, midpoint method (Tm)
6777044thermal denaturation, midpoint method (Tm)

External links

@ref: 1038

culture collection no.: DSM 2310, ATCC 23493, NCIB 10270, JCM 2514, IAM 12322, NCIMB 10270, CIP 104422

straininfo link

  • @ref: 83530
  • straininfo: 46618

Reference

@idauthorscataloguedoi/urltitle
1038Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2310)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2310
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
37933Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/16329
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
83530Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID46618.1StrainInfo: A central database for resolving microbial strain identifiers
120547Curators of the CIPCollection of Institut Pasteur (CIP 104422)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104422