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BacDive ID 144849
Type strain
Culture col. no. CCUG 26784
NCBI tax ID(s) 59505
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 48571

BacDive-ID: 144849

description: Actinotignum schaalii CCUG 26784 is a prokaryote that was isolated from Human urine.

NCBI tax id

  • NCBI tax id: 59505
  • Matching level: species

doi: 10.13145/bacdive144849.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/bacillati
  • keyword: phylum/actinomycetota
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Actinomycetales
  • family: Actinomycetaceae
  • genus: Actinotignum
  • species: Actinotignum schaalii
  • full scientific name: Actinotignum schaalii (Lawson et al. 1997) Yassin et al. 2015

  • synonyms

    • @ref: 20215
    • synonym: Actinobaculum schaalii

@ref: 48571

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Actinomycetaceae

genus: Actinotignum

species: Actinotignum schaalii

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838116199urea-hydrolysis
6838116443D-tagatose-builds acid from
68381320055methyl beta-D-glucopyranoside-builds acid from
683816731melezitose-builds acid from
6838128053melibiose-builds acid from
6838117306maltose+builds acid from
6838127941pullulan-builds acid from
6838128087glycogen-builds acid from
68381606565hippurate+hydrolysis
6838140585alpha-cyclodextrin-builds acid from
6838118333D-arabitol-builds acid from
6838130849L-arabinose+builds acid from
6838117992sucrose+builds acid from
6838127082trehalose+builds acid from
6838117716lactose-builds acid from
6838116899D-mannitol-builds acid from
6838116988D-ribose+builds acid from
6838129016arginine-hydrolysis
6837916899D-mannitol-fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837916988D-ribose-fermentation
6837965327D-xylose+fermentation
6838116634raffinose-builds acid from
6838130911sorbitol-builds acid from

metabolite production

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: no

metabolite tests

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
68381urease-3.5.1.5
68381pyrrolidonyl arylamidase+3.4.19.3
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381glycyl tryptophan arylamidase-
68381arginine dihydrolase-3.5.3.6
68381beta-glucosidase-3.2.1.21
68381beta-glucuronidase-3.2.1.31
68381alpha-galactosidase-3.2.1.22
68381alkaline phosphatase-3.1.3.1
68381Alanyl-Phenylalanyl-Proline arylamidase+
68379beta-glucosidase-3.2.1.21
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrazinamidase+3.5.1.B15
68381beta-mannosidase-3.2.1.25
68381beta-galactosidase-3.2.1.23
68379urease-3.5.1.5
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379gelatinase-
68379pyrrolidonyl arylamidase+3.4.19.3

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    48571C10:02.410
    48571C12:02.212
    48571C14:017.514
    48571C16:030.416
    48571C18:05.518
    48571C16:1 ω9c1.915.774
    48571C18:1 ω9c2317.769
    48571C18:2 ω6,9c/C18:0 ANTE1717.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlRIBXYLMANLACSACGLYG
48571-++---+------+--+-

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
48571------+---+-++---+-+--+--+------

Isolation, sampling and environmental information

isolation

  • @ref: 48571
  • sample type: Human urine
  • sampling date: 1990-05-22
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Urine

Literature

@ref: 48571

culture collection no.: CCUG 26784

straininfo link

  • @ref: 126262
  • straininfo: 53953

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
48571Curators of the CCUGhttps://www.ccug.se/strain?id=26784Culture Collection University of Gothenburg (CCUG) (CCUG 26784)
68379Automatically annotated from API Coryne
68381Automatically annotated from API rID32STR
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059

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