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BacDive ID 146663
Type strain
Culture col. no. CCUG 31748
NCBI tax ID(s) 67826
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 50711

BacDive-ID: 146663

description: Citrobacter sedlakii CCUG 31748 is a prokaryote that was isolated from Human urine,86-yr-old man.

NCBI tax id

  • NCBI tax id: 67826
  • Matching level: species

doi: 10.13145/bacdive146663.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Citrobacter
  • species: Citrobacter sedlakii
  • full scientific name: Citrobacter sedlakii Brenner et al. 1993

@ref: 50711

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Citrobacter

species: Citrobacter sedlakii

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417057cellobiose+builds acid from
6837417268myo-inositol-builds acid from
6837462345L-rhamnose+builds acid from
6837427082trehalose+builds acid from
6837418333D-arabitol-builds acid from
6837417992sucrose-builds acid from
6837430849L-arabinose+builds acid from
6837417634D-glucose+builds acid from
6837415792malonate+assimilation
6837427897tryptophan+energy source
6837418394palatinose-builds acid from
6837415963ribitol-builds acid from
6837417306maltose+builds acid from
6837416899D-mannitol+builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418024D-galacturonic acid+builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837418257ornithine+degradation
6837429016arginine-hydrolysis

metabolite production

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68374L-aspartate arylamidase-3.4.11.21
68374alpha-glucosidase-3.2.1.20
68374alpha-galactosidase+3.2.1.22
68374alpha-maltosidase-
68374ornithine decarboxylase+4.1.1.17
68374beta-galactosidase+3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase-3.2.1.21
68374lipase-
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
50711+----+--+-++---++-++-+--+++-+---

Isolation, sampling and environmental information

isolation

  • @ref: 50711
  • sample type: Human urine,86-yr-old man
  • sampling date: 1993-07-01
  • geographic location: Stockholm
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Urine
#Infection#Patient

Literature

@ref: 50711

culture collection no.: CCUG 31748

straininfo link

  • @ref: 126262
  • straininfo: 52832

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
50711Curators of the CCUGhttps://www.ccug.se/strain?id=31748Culture Collection University of Gothenburg (CCUG) (CCUG 31748)
68374Automatically annotated from API ID32E
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059