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BacDive ID 147699
Type strain
Culture col. no. CCUG 34033
NCBI tax ID(s) 666
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 51900

BacDive-ID: 147699

description: Vibrio cholerae CCUG 34033 is a prokaryote that was isolated from Human ear.

NCBI tax id

  • NCBI tax id: 666
  • Matching level: species

doi: 10.13145/bacdive147699.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio cholerae
  • full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Vibrio albensis

@ref: 51900

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio cholerae

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417057cellobiose-builds acid from
6837417268myo-inositol-builds acid from
6837462345L-rhamnose-builds acid from
6837427082trehalose-builds acid from
6837418333D-arabitol-builds acid from
6837430849L-arabinose-builds acid from
6837417992sucrose-builds acid from
6837417634D-glucose-builds acid from
6837427897tryptophan-energy source
6837415792malonate-assimilation
6837418394palatinose-builds acid from
6837415963ribitol-builds acid from
6837416899D-mannitol-builds acid from
6837417306maltose-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837429016arginine-hydrolysis
6837418257ornithine+degradation

metabolite production

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68374L-aspartate arylamidase+3.4.11.21
68374alpha-glucosidase-3.2.1.20
68374alpha-galactosidase-3.2.1.22
68374alpha-maltosidase-
68374beta-glucuronidase-3.2.1.31
68374arginine dihydrolase-3.5.3.6
68374lysine decarboxylase-4.1.1.18
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374ornithine decarboxylase+4.1.1.17
68374beta-galactosidase+3.2.1.23

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
51900+------+-+--------+------------+

Isolation, sampling and environmental information

isolation

  • @ref: 51900
  • sample type: Human ear
  • sampling date: 1995-02-01
  • geographic location: Danderyd
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Organ#Ear

Literature

@ref: 51900

culture collection no.: CCUG 34033

straininfo link

  • @ref: 126262
  • straininfo: 58235

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51900Curators of the CCUGhttps://www.ccug.se/strain?id=34033Culture Collection University of Gothenburg (CCUG) (CCUG 34033)
68374Automatically annotated from API ID32E
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059