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BacDive ID 148057
Type strain
Culture col. no. CCUG 34741
NCBI tax ID(s) 28188
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 52295

BacDive-ID: 148057

keywords: anaerobe, mesophilic

description: Capnocytophaga canimorsus CCUG 34741 is an anaerobe, mesophilic prokaryote that was isolated from Human blood,fever,coughing,pneumonia,otitis.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive148057.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/bacteroidota
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 52295

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 52295
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 52295
  • oxygen tolerance: anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838027897tryptophan-energy source
6838017632nitrate-reduction
6838016634raffinose-fermentation
6838029016arginine-hydrolysis
6838016024D-mannose-fermentation
6837716199urea-hydrolysis
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717634D-glucose+builds acid from
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea+hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction
6838029985L-glutamate-degradation
6838016199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

@refChebi-IDmetaboliteproduction
6838035581indoleno
6836935581indoleno
6837735581indoleno

metabolite tests

@refChebi-IDmetaboliteindole test
6838035581indole-
6837735581indole-
6836935581indole-

enzymes

@refvalueactivityec
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-glucosidase+3.2.1.20
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin+3.4.21.4
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68380tyrosine arylamidase+
68380pyrrolidonyl arylamidase-3.4.19.3
68380phenylalanine arylamidase+
68380leucine arylamidase+3.4.11.1
68380leucyl glycin arylamidase+3.4.11.1
68380alkaline phosphatase+3.1.3.1
68380L-arginine arylamidase+
68380beta-glucuronidase-3.2.1.31
68380N-acetyl-beta-glucosaminidase+3.2.1.52
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase-3.2.1.21
68380alpha-galactosidase-3.2.1.22
68380beta-galactosidase+3.2.1.23
68380beta-Galactosidase 6-phosphate-
68380alpha-glucosidase+3.2.1.20
68380arginine dihydrolase-3.5.3.6
68377tryptophan deaminase-4.1.99.1
68377beta-galactosidase+3.2.1.23
68377proline-arylamidase-3.4.11.5
68377urease-3.5.1.5
68377beta-lactamase-3.5.2.6
68377ornithine decarboxylase-4.1.1.17
68380serine arylamidase+
68380glutamyl-glutamate arylamidase+
68380histidine arylamidase+
68380glycin arylamidase+
68380alanine arylamidase+3.4.11.2
68380proline-arylamidase-3.4.11.5
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase+3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380urease-3.5.1.5
68377alkaline phosphatase+3.1.3.1
68377lipase-
68369cytochrome oxidase-1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease+3.5.1.5
68369arginine dihydrolase-3.5.3.6
68377gamma-glutamyltransferase-2.3.2.2
68382beta-glucosidase-3.2.1.21
68382cystine arylamidase+3.4.11.3

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52295C14:0114
    52295C15:00.315
    52295C16:014.416
    52295C17:00.217
    52295C18:02.618
    52295C13:0 iso0.212.612
    52295C14:0 3OH/C16:1 ISO I0.515.485
    52295C15:0 ANTEISO1.314.711
    52295C15:0 ISO3714.621
    52295C15:0 ISO 3OH5.416.135
    52295C16:0 3OH3.517.52
    52295C16:0 iso0.515.626
    52295C16:0 iso 3OH0.317.145
    52295C16:1 ω7c1.115.819
    52295C17:0 iso 3OH9.518.161
    52295C18:0 3OH0.319.551
    52295C18:1 ω9c4.317.769
    52295C18:2 ω6,9c/C18:0 ANTE11.517.724
    52295C20:4 ω6,9,12,15c0.319.395
    52295Unidentified0.315.947
    52295Unidentified4.117.795
    52295unknown 13.5660.813.566
    52295unknown 16.5800.816.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52295-+++-++++-++---+-+--

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
52295+---+--+-------------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
52295-++++---++---

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
52295---+-+---+---+--++-+++-++++++

Isolation, sampling and environmental information

isolation

  • @ref: 52295
  • sample type: Human blood,fever,coughing,pneumonia,otitis
  • sampling date: 1995-08-20
  • geographic location: Skövde
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

Literature

@ref: 52295

culture collection no.: CCUG 34741

straininfo link

  • @ref: 126262
  • straininfo: 52518

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52295Curators of the CCUGhttps://www.ccug.se/strain?id=34741Culture Collection University of Gothenburg (CCUG) (CCUG 34741)
68369Automatically annotated from API 20NE
68377Automatically annotated from API NH
68380Automatically annotated from API rID32A
68382Automatically annotated from API zym
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059

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