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BacDive ID 148311
Type strain
Culture col. no. CCUG 35210
NCBI tax ID(s) 194249
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 52593

BacDive-ID: 148311

description: Rhodococcus sp. CCUG 35210 is a prokaryote that was isolated from Human lung punction.

NCBI tax id

  • NCBI tax id: 194249
  • Matching level: species

doi: 10.13145/bacdive148311.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/bacillati
  • keyword: phylum/actinomycetota
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Nocardiaceae
  • genus: Rhodococcus
  • species: Rhodococcus sp.
  • full scientific name: Rhodococcus Zopf 1891 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Prescottia
    20215Prescottella
    20215Prescottella
    20215Rhodococcoides

@ref: 52593

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Rhodococcus

species: Rhodococcus sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
683795291gelatin-hydrolysis
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837917306maltose-fermentation
6837917634D-glucose+fermentation
6837916199urea+hydrolysis

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase+3.4.11.3
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68379catalase+1.11.1.6
68379gelatinase-
68379beta-glucosidase+3.2.1.21
68379alpha-glucosidase+3.2.1.20
68379alkaline phosphatase+3.1.3.1
68379beta-glucuronidase-3.2.1.31
68379beta-galactosidase-3.2.1.23
68379urease+3.5.1.5
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alpha-mannosidase-3.2.1.24
68382alpha-glucosidase+3.2.1.20

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52593C14:09.114
    52593C15:05.715
    52593C16:019.116
    52593C18:01.418
    52593C19:03.319
    52593C20:02.220
    52593C15:1 ω5c1.214.904
    52593C16:1 ω7c2.415.819
    52593C16:1 ω7c/C15:0 ISO 2OH12.615.85
    52593C17:1 ω8c2.716.792
    52593C18:1 ω9c16.517.769
    52593C18:2 ω6,9c/C18:0 ANTE12.617.724
    52593C19:1 ω11c/19:1 ω9c1.518.762
    52593TBSA 10Me18:09.518.392
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
52593++-+--+-++--+-------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52593-+++-+++--++---++---

Isolation, sampling and environmental information

isolation

  • @ref: 52593
  • sample type: Human lung punction
  • sampling date: 1995-12-06
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Oral cavity and airways#Lung
#Infection#Patient#Biopsy

Literature

@ref: 52593

culture collection no.: CCUG 35210

straininfo link

  • @ref: 126262
  • straininfo: 56685

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52593Curators of the CCUGhttps://www.ccug.se/strain?id=35210Culture Collection University of Gothenburg (CCUG) (CCUG 35210)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059

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