@ref: 9948
BacDive-ID: 14914
DSM-Number: 41007
keywords: genome sequence, 16S sequence, Bacteria, spore-forming, mesophilic
description: Streptomyces albidoflavus FBUA 521 is a spore-forming, mesophilic bacterium that was isolated from soil enriched with dead, dry tubercle bacilli .
| @ref | history |
|---|---|
| 9948 | <- R.E. Gordon <- S.A. Waksman <- Dept. of Microbiol., N.J. A.E.S. |
| 67770 | KCC S-0020 <-- Y. Okami (NIHJ 147) <-- T. Yamaguchi <-- IFO 3176 <-- ATCC 10147 <-- S. A. Waksman 3034. |
doi: 10.13145/bacdive14914.20250331.9.3
| @ref | synonym |
|---|---|
| 20215 | Streptothrix coelicolor |
| 20215 | Streptomyces champavatii |
| 20215 | Streptomyces limosus |
| 20215 | Streptomyces globisporus subsp. caucasicus |
| 20215 | Streptotrix albidoflava |
| 20215 | Streptomyces griseus subsp. solvifaciens |
| 20215 | Actinomyces sampsonii |
| 20215 | Actinomyces globisporus subsp. caucasicus |
| 20215 | Cladothrix odorifera |
| 20215 | Streptomyces canescens |
| 20215 | Streptomyces felleus |
| 20215 | Streptomyces sampsonii |
| 20215 | Streptomyces odorifer |
| 20215 | Streptomyces coelicolor |
@ref: 9948
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces albidoflavus
full scientific name: Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 emend. Nouioui et al. 2018
strain designation: FBUA 521, BU 3,4, BU 3,5
type strain: no
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9948 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9948 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
| @ref | growth | type | temperature |
|---|---|---|---|
| 9948 | positive | growth | 28 |
| 67770 | positive | growth | 28 |
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Laboratory | #Lab enrichment |
| #Environmental | #Terrestrial | #Soil |
| #Host | #Microbial | #Bacteria |
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 89.27 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 98.383 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 88.928 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 92.427 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 96.5 | yes |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 89 | no |
@ref: 9948
culture collection no.: DSM 41007, ATCC 10147, ETH 9448, HMGB B 906, IAM 0032, IFO 3176, IMET 40271, IMRU 3034, KCC S-0020, NBRC 3176, NIHJ 147, RIA 73, HUT 6005, PSA 42, JCM 4020, CECT 3243
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 2272494 | pS10147-2, a 3.7 kb multicopy plasmid isolated from Streptomyces coelicolor. | Zakrzewska-Czerwinska J, Gaszewska A, Mordarski M | FEMS Microbiol Lett | 10.1016/0378-1097(90)90232-f | 1990 | Blotting, Southern, Cloning, Molecular, DNA/analysis, Plasmids/*genetics, Restriction Mapping, Streptomyces/*genetics | |
| Phylogeny | 6267433 | Isolation and physical characterization of streptomycete plasmids. | Pernodet JL, Guerineau M | Mol Gen Genet | 10.1007/BF00422766 | 1981 | DNA Restriction Enzymes/metabolism, DNA, Bacterial/analysis/*isolation & purification, DNA, Circular/isolation & purification, Deoxyribonucleotides/analysis, Microscopy, Electron, Nucleic Acid Hybridization, *Plasmids, Streptomyces/*analysis/genetics | Enzymology |
| Enzymology | 7881556 | Characterization of the major catalase from Streptomyces coelicolor ATCC 10147. | Kim H, Lee JS, Hah YC, Roe JH | Microbiology (Reading) | 10.1099/13500872-140-12-3391 | 1994 | Catalase/chemistry/genetics/*isolation & purification, Enzyme Stability, Escherichia coli/enzymology, Genes, Bacterial, Molecular Weight, Mutagenesis, Spectrophotometry, Streptomyces/*enzymology/genetics/growth & development | Phylogeny |
| Enzymology | 8898904 | Differential expression of superoxide dismutases containing Ni and Fe/Zn in Streptomyces coelicolor. | Kim FJ, Kim HP, Hah YC, Roe JH | Eur J Biochem | 10.1111/j.1432-1033.1996.0178t.x | 1996 | Amino Acid Sequence, Chelating Agents/pharmacology, Edetic Acid/pharmacology, Electrophoresis, Polyacrylamide Gel, Gene Expression Regulation, Fungal/*genetics, Metals, Heavy/analysis/metabolism, Molecular Sequence Data, Nickel/*metabolism/pharmacology, Oxidative Stress, Paraquat/pharmacology, Sequence Homology, Amino Acid, Spectrophotometry, Streptomyces/*enzymology, Superoxide Dismutase/classification/isolation & purification/*metabolism | Metabolism |
| Metabolism | 35834474 | Effects of carbon ion beam-induced mutagenesis for the screening of RED production-deficient mutants of Streptomyces coelicolor JCM4020. | Yanagisawa M, Asamizu S, Satoh K, Oono Y, Onaka H | PLoS One | 10.1371/journal.pone.0270379 | 2022 | Anti-Bacterial Agents/metabolism, Carbon/metabolism, Ions/metabolism, Mutagenesis, *Streptomyces coelicolor/genetics/metabolism, Streptomyces lividans/metabolism | Biotechnology |
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9948 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41007) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41007 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 84023 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID46471.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | 10.1101/2024.08.12.607695 | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets |
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