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BacDive ID 150696
Type strain
Culture col. no. CCUG 41979
NCBI tax ID(s) 666
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 55293

BacDive-ID: 150696

description: Vibrio cholerae CCUG 41979 is a prokaryote that was isolated from Chinese raw crayfish.

NCBI tax id

  • NCBI tax id: 666
  • Matching level: species

doi: 10.13145/bacdive150696.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio cholerae
  • full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Vibrio albensis

@ref: 55293

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio cholerae

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417057cellobiose-builds acid from
6837417268myo-inositol-builds acid from
6837462345L-rhamnose-builds acid from
6837427082trehalose-builds acid from
6837418333D-arabitol-builds acid from
6837430849L-arabinose-builds acid from
6837417992sucrose-builds acid from
6837417634D-glucose+builds acid from
6837427897tryptophan+energy source
6837415792malonate-assimilation
6837415963ribitol-builds acid from
6837418394palatinose-builds acid from
6837416899D-mannitol-builds acid from
6837417306maltose+builds acid from
6837418024D-galacturonic acid-builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837429016arginine-hydrolysis
6837418257ornithine+degradation
68374Potassium 5-ketogluconate-builds acid from

metabolite production

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68374alpha-glucosidase-3.2.1.20
68374alpha-galactosidase-3.2.1.22
68374alpha-maltosidase+
68374N-acetyl-beta-glucosaminidase+3.2.1.52
68374beta-galactosidase+3.2.1.23
68374arginine dihydrolase-3.5.3.6
68374lysine decarboxylase-4.1.1.18
68374L-aspartate arylamidase-3.4.11.21
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374ornithine decarboxylase+4.1.1.17

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
55293+------+-+-+----++++----------+-

Isolation, sampling and environmental information

isolation

  • @ref: 55293
  • sample type: Chinese raw crayfish
  • sampling date: 1999-03-01
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

  • Cat1: #Host
  • Cat2: #Fishes

Literature

@ref: 55293

culture collection no.: CCUG 41979

straininfo link

  • @ref: 126262
  • straininfo: 109144

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
55293Curators of the CCUGhttps://www.ccug.se/strain?id=41979Culture Collection University of Gothenburg (CCUG) (CCUG 41979)
68374Automatically annotated from API ID32E
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059