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BacDive ID 151913
Type strain
Culture col. no. CCUG 45182
NCBI tax ID(s) 37329
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 56683

BacDive-ID: 151913

description: Nocardia farcinica CCUG 45182 is a prokaryote that was isolated from Human vein graft operation,68-yr-old man.

NCBI tax id

  • NCBI tax id: 37329
  • Matching level: species

doi: 10.13145/bacdive151913.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/bacillati
  • keyword: phylum/actinomycetota
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Nocardiaceae
  • genus: Nocardia
  • species: Nocardia farcinica
  • full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

@ref: 56683

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Nocardia

species: Nocardia farcinica

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea+hydrolysis
6837917306maltose-fermentation
683795291gelatin-hydrolysis

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)-
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68379gelatinase-
68379catalase+1.11.1.6
68379pyrrolidonyl arylamidase+3.4.19.3
68379alkaline phosphatase+3.1.3.1
68379pyrazinamidase+3.5.1.B15
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379urease+3.5.1.5
68382alpha-glucosidase+3.2.1.20

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
56683-+++--+-++----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
56683-++--+----++-+-++---

Isolation, sampling and environmental information

isolation

  • @ref: 56683
  • sample type: Human vein graft operation,68-yr-old man
  • sampling date: 2001-04-01
  • geographic location: Karlstad
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Infection#Patient

Literature

@ref: 56683

culture collection no.: CCUG 45182

straininfo link

  • @ref: 126262
  • straininfo: 110301

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56683Curators of the CCUGhttps://www.ccug.se/strain?id=45182Culture Collection University of Gothenburg (CCUG) (CCUG 45182)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059