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BacDive ID 153447
Type strain
Culture col. no. CCUG 49619
NCBI tax ID(s) 362
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 58632

BacDive-ID: 153447

keywords: aerobe, mesophilic

description: Agrobacterium radiobacter CCUG 49619 is an aerobe, mesophilic prokaryote that was isolated from Human bronchus brush rinse,57-yr-old man.

NCBI tax id

  • NCBI tax id: 362
  • Matching level: species

doi: 10.13145/bacdive153447.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Rhizobiaceae
  • genus: Agrobacterium
  • species: Agrobacterium radiobacter
  • full scientific name: Agrobacterium radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Bacillus radiobacter
    20215Rhizobium radiobacter
    20215Beijerinckia fluminensis

@ref: 58632

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Hyphomicrobiales

family: Rhizobiaceae

genus: Agrobacterium

species: Agrobacterium radiobacter

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58632
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 58632
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin+hydrolysis
6836916199urea+hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369arginine dihydrolase-3.5.3.6
68369urease+3.5.1.5
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase+3.2.1.21

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58632C16:09.816
    58632C12:0 ALDE ?0.410.915
    58632C13:1 at 12-13112.931
    58632C14:0 3OH/C16:1 ISO I6.615.485
    58632C16:0 3OH317.52
    58632C16:1 ω7c215.819
    58632C18:1 ω7c /12t/9t66.517.824
    58632C19:0 CYCLO ω8c10.818.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
58632----++-++++++++--+--+

Isolation, sampling and environmental information

isolation

  • @ref: 58632
  • sample type: Human bronchus brush rinse,57-yr-old man
  • sampling date: 2004-08-06
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Oral cavity and airways#Lung
#Infection#Medical environment#Medical practice
#Infection#Patient

Literature

@ref: 58632

culture collection no.: CCUG 49619

straininfo link

  • @ref: 126262
  • straininfo: 214762

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58632Curators of the CCUGhttps://www.ccug.se/strain?id=49619Culture Collection University of Gothenburg (CCUG) (CCUG 49619)
68369Automatically annotated from API 20NE
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059