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BacDive ID 159684
Type strain
Culture col. no. DSM 100620 JCM 30868 SBC 8065
NCBI tax ID(s) 2053716
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 9.2 (current version):
version 9.2 (current version)

General

@ref: 66535

BacDive-ID: 159684

DSM-Number: 100620

keywords: 16S sequence, Bacteria, mesophilic

description: Prevotella cerevisiae DSM 100620 is a mesophilic bacterium that was isolated from brewery wastewater.

NCBI tax id

  • NCBI tax id: 2053716
  • Matching level: species

strain history

@refhistory
66535<- H. Kanda, Sapporo Breweries Ltd., Yaizu, Shizuoka, Japan; SBC8065 <- Y. Nakakita
67770H. Kanda; Sapporo Breweries Ltd., Japan; SBC8065.

doi: 10.13145/bacdive159684.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Prevotellaceae
  • genus: Prevotella
  • species: Prevotella cerevisiae
  • full scientific name: Prevotella cerevisiae Nakata et al. 2019

  • synonyms

    • @ref: 20215
    • synonym: Segatella cerevisiae

@ref: 66535

domain: Bacteria

phylum: Not assigned to order

class: Not assigned to order

order: Not assigned to order

family: Not assigned to family

genus: Segatella

species: Segatella cerevisiae

full scientific name: Segatella cerevisiae (Nakata et al. 2019) Hitch et al. 2023

type strain: no

Culture and growth conditions

culture medium

  • @ref: 66535
  • name: MRS MEDIUM (DSMZ Medium 11)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/11
  • composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

culture temp

@refgrowthtypetemperature
66535positivegrowth30
67770positivegrowth30

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838017632nitrate-reduction
6838029985L-glutamate-degradation
6838016634raffinose+fermentation
6838016024D-mannose-fermentation
6838016199urea-hydrolysis
6838029016arginine-hydrolysis
6838027897tryptophan-energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68380serine arylamidase-
68380histidine arylamidase-
68380alanine arylamidase+3.4.11.2
68380tyrosine arylamidase-
68380pyrrolidonyl arylamidase-3.4.19.3
68380phenylalanine arylamidase-
68380leucyl glycin arylamidase+3.4.11.1
68380proline-arylamidase-3.4.11.5
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380beta-glucuronidase-3.2.1.31
68380beta-glucosidase+3.2.1.21
68380alpha-glucosidase+3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68380arginine dihydrolase-3.5.3.6
68380alpha-galactosidase+3.2.1.22
68380urease-3.5.1.5
68380glutamyl-glutamate arylamidase-
68380glycin arylamidase-
68380L-arginine arylamidase-
68380alkaline phosphatase+3.1.3.1
68380N-acetyl-beta-glucosaminidase+3.2.1.52
68380alpha-arabinosidase+3.2.1.55

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
66535--++-+++-+-+----+--+-+/---+----

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
66535brewery wastewaterOsaka prefectureJapanJPNAsia
67770Brewery wastewaterJapanJPNAsia

isolation source categories

Cat1Cat2Cat3
#Engineered#Waste#Industrial wastewater
#Engineered#Waste#Wastewater

taxonmaps

  • @ref: 69479
  • File name: preview.99_57181.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_2396;96_25398;97_31832;98_40779;99_57181&stattab=map
  • Last taxonomy: Prevotellaceae
  • 16S sequence: LC331292
  • Sequence Identity:
  • Total samples: 884
  • soil counts: 62
  • aquatic counts: 303
  • animal counts: 435
  • plant counts: 84

Sequence information

16S sequences

  • @ref: 66535
  • description: Prevotella cerevisiae JCM 30868 gene for 16S rRNA, partial sequence
  • accession: LC331292
  • length: 1414
  • database: nuccore
  • NCBI tax ID: 2053716

GC content

  • @ref: 67770
  • GC-content: 45.3
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 66535

culture collection no.: DSM 100620, JCM 30868, SBC 8065

straininfo link

  • @ref: 112154
  • straininfo: 402454

literature

  • topic: Phylogeny
  • Pubmed-ID: 30990398
  • title: Prevotella cerevisiae sp. nov., beer-spoilage obligate anaerobic bacteria isolated from brewery wastewater.
  • authors: Nakata H, Kanda H, Nakakita Y, Kaneko T, Tsuchiya Y
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.003393
  • year: 2019
  • mesh: Bacteria, Anaerobic/genetics, Bacterial Typing Techniques, Base Composition, Beer/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Food Microbiology, Genes, Bacterial, *Phylogeny, Prevotella/*classification/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Waste Water/*microbiology
  • topic2: Biotechnology

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
66535Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-100620Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 100620)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68380Automatically annotated from API rID32A
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
112154Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID402454.1

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