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BacDive ID 162122
Type strain
Culture col. no. JCM 17856
NCBI tax ID(s) 2321133
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 67770

BacDive-ID: 162122

keywords: 16S sequence, mesophilic

description: Halarcobacter sp. JCM 17856 is a mesophilic prokaryote that was isolated from Surface seawater of the South Pacific Ocean.

NCBI tax id

  • NCBI tax id: 2321133
  • Matching level: species

strain history

  • @ref: 67770
  • history: X.-H. Zhang SW026.

doi: 10.13145/bacdive162122.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Arcobacteraceae
  • genus: Halarcobacter
  • species: Halarcobacter sp.
  • full scientific name: Halarcobacter corrig. Pérez-Cataluña et al. 2019
  • synonyms

    @refsynonym
    20215Aliarcobacter
    20215Arcobacter
    20215Malacobacter
    20215Haloarcobacter
    20215Malaciobacter
    20215Pseudarcobacter
    20215Aliarcobacter
    20215Poseidonibacter
    20215Pseudoarcobacter

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Arcobacteraceae

genus: Halarcobacter

species: Halarcobacter sp.

full scientific name: Halarcobacter sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 30

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Surface seawater of the South Pacific Ocean

taxonmaps

  • @ref: 69479
  • File name: preview.99_43781.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_53;96_9780;97_11786;98_14481;99_43781&stattab=map
  • Last taxonomy: Halarcobacter ebronensis subclade
  • 16S sequence: JN118550
  • Sequence Identity:
  • Total samples: 309
  • soil counts: 17
  • aquatic counts: 250
  • animal counts: 33
  • plant counts: 9

Sequence information

16S sequences

  • @ref: 67770
  • description: Arcobacter sp. sw026 16S ribosomal RNA gene, partial sequence
  • accession: JN118550
  • length: 1426
  • database: nuccore
  • NCBI tax ID: 1080222

Literature

@ref: 67770

culture collection no.: JCM 17856

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/