@ref: 67770
BacDive-ID: 162450
keywords: genome sequence, 16S sequence, Bacteria, mesophilic, motile
description: Vibrio salilacus JCM 19265 is a mesophilic, motile bacterium that was isolated from Dasugan Lake.
doi: 10.13145/bacdive162450.20250331.9.3
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales
family: Vibrionaceae
genus: Vibrio
species: Vibrio salilacus
full scientific name: Vibrio salilacus Zhong et al. 2015
type strain: yes
| @ref | gram stain | confidence | motility |
|---|---|---|---|
| 125439 | negative | 97 | |
| 125438 | 90.044 | yes | |
| 125438 | negative | 100 |
| @ref | spore formation | confidence |
|---|---|---|
| 125439 | no | 98.4 |
| 125438 | no | 91.11 |
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 100 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 94.533 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 51.01 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 91.11 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 99 | yes |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | yes | 90.044 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 98.4 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | yes | 70.9 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | negative | 97 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | obligate aerobe | 97.1 |
@ref: 67770
culture collection no.: JCM 19265, CGMCC 1.12427
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG |
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