Archive BacDiveID:10.13145/bacdive163569.20251217.10

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BacDive ID 163569

Type strain

Culture col. no. JCM 28704

NCBI tax ID(s) 1818808

Links

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For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 67770

BacDive-ID: 163569

keywords: 16S sequence, mesophilic

description: Microbacterium sp. JCM 28704 is a mesophilic prokaryote that was isolated from Brownish viscous gels on the stone of the south wall in the stone chamber.

NCBI tax id

NCBI tax id: 1818808
Matching level: species

strain history

@ref: 67770
history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; K9703-1-1b.

doi: 10.13145/bacdive163569.20251217.10

Name and taxonomic classification

LPSN

@ref: 20215
description: kingdom/bacillati
keyword: phylum/actinomycetota
phylum: Actinomycetota
class: Actinomycetes
order: Micrococcales
family: Microbacteriaceae
genus: Microbacterium
species: Microbacterium sp.
full scientific name: Microbacterium Orla-Jensen 1919 (Approved Lists 1980)
synonyms
@ref synonym
20215 Aureobacterium
20215 Paramicrobacterium

@ref	synonym
20215	Aureobacterium
20215	Paramicrobacterium

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Microbacteriaceae

genus: Microbacterium

species: Microbacterium sp.

full scientific name: Microbacterium sp.

type strain: no

Culture and growth conditions

culture temp

@ref: 67770
growth: positive
type: growth
temperature: 28

Isolation, sampling and environmental information

isolation

@ref: 67770
sample type: Brownish viscous gels on the stone of the south wall in the stone chamber
geographic location: Kitora Tumulus, Asuka Village, Nara Pref.
country: Japan
origin.country: JPN
continent: Asia

taxonmaps

@ref: 69479
File name: preview.99_191.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_137;97_148;98_165;99_191&stattab=map
Last taxonomy: Microbacterium
16S sequence: LC133735
Sequence Identity:
Total samples: 42253
soil counts: 10113
aquatic counts: 9581
animal counts: 16954
plant counts: 5605

Sequence information

16S sequences

@ref: 67770
description: Microbacterium sp. JCM 28704 gene for 16S ribosomal RNA, partial sequence
accession: LC133735
length: 1484
database: nuccore
NCBI tax ID: 1818808

Literature

@ref: 67770

culture collection no.: JCM 28704

straininfo link

@ref: 126262
straininfo: 131494

Reference

@id	authors	title	doi/url
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
67770	Curators of the JCM		https://jcm.brc.riken.jp/en/
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.	MicrobeAtlas 1.0 beta	https://microbeatlas.org/
126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer	StrainInfo—the central database for linked microbial strain identifiers	10.1093/database/baaf059

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General

NCBI tax id

strain history

Name and taxonomic classification

LPSN

synonyms

Culture and growth conditions

culture temp

Isolation, sampling and environmental information

isolation

taxonmaps

Sequence information

16S sequences

Literature

straininfo link

Reference

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