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BacDive ID 163957
Type strain
Culture col. no. KCTC 39634 JCM 31134
NCBI tax ID(s) 1720260
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 67770

BacDive-ID: 163957

keywords: 16S sequence, mesophilic

description: Thalassiella azotivora JCM 31134 is a mesophilic prokaryote that was isolated from Seawater from Sadong wharf.

NCBI tax id

  • NCBI tax id: 1720260
  • Matching level: species

strain history

  • @ref: 67770
  • history: T. Seo; Dept. of Life Sci., Dongguk Univ., South Korea; DSD2.

doi: 10.13145/bacdive163957.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/bacillati
  • keyword: phylum/actinomycetota
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kineosporiales
  • family: Kineosporiaceae
  • genus: Thalassiella
  • species: Thalassiella azotivora
  • full scientific name: Thalassiella azotivora corrig. Lee et al. 2017
  • synonyms

    • @ref: 20215
    • synonym: Thalassiella azotovora

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Kineosporiales

family: Kineosporiaceae

genus: Thalassiella

species: Thalassiella azotivora

full scientific name: Thalassiella azotivora Lee et al. 2017

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-8(H2), MK-9(H4)

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Seawater from Sadong wharf
  • geographic location: Ulleung Island
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_70013.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_6608;97_37887;98_49152;99_70013&stattab=map
  • Last taxonomy: Thalassiella azotivora subclade
  • 16S sequence: KT630890
  • Sequence Identity:
  • Total samples: 1322
  • soil counts: 576
  • aquatic counts: 179
  • animal counts: 349
  • plant counts: 218

Sequence information

16S sequences

  • @ref: 67770
  • description: Thalassiella azotivora strain DSD2 16S ribosomal RNA gene, partial sequence
  • accession: KT630890
  • length: 1466
  • database: nuccore
  • NCBI tax ID: 1720260

GC content

  • @ref: 67770
  • GC-content: 73.21
  • method: thermal denaturation, midpoint method (Tm)

Literature

@ref: 67770

culture collection no.: JCM 31134, KCTC 39634

straininfo link

  • @ref: 126262
  • straininfo: 27943

literature

  • topic: Phylogeny
  • Pubmed-ID: 27502175
  • title: Thalassiella azotovora gen. nov., sp. nov., a New Member of the Family Kineosporiaceae Isolated from Sea Water in South Korea.
  • authors: Lee D, Jang JH, Cha S, Seo T
  • journal: Curr Microbiol
  • DOI: 10.1007/s00284-016-1112-y
  • year: 2016
  • mesh: Actinomycetales/classification/genetics/*isolation & purification/metabolism, Base Composition, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/chemistry/metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Seawater/*microbiology
  • topic2: Metabolism

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059