General

@ref: 67770

BacDive-ID: 165138

keywords: 16S sequence, Bacteria, mesophilic

description: Clostridioides difficile JCM 5256 is a mesophilic bacterium of the family Peptostreptococcaceae.

NCBI tax id

• NCBI tax id: 1496
• Matching level: species

strain history

• @ref: 67770
• history: M. Seki <-- Meiji Seika Kaisha, Ltd..

doi: 10.13145/bacdive165138.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Clostridia
• order: Eubacteriales
• family: Peptostreptococcaceae
• genus: Clostridioides
• species: Clostridioides difficile
• full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

• synonyms

  @ref	synonym
  20215	Peptoclostridium difficile
  20215	Bacillus difficilis
  20215	Clostridium difficile

@ref: 67770

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Peptostreptococcaceae

genus: Clostridioides

species: Clostridioides difficile

full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016

type strain: no

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 37

Isolation, sampling and environmental information

taxonmaps

• @ref: 69479
• File name: preview.99_78.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_2;96_63;97_66;98_71;99_78&stattab=map
• Last taxonomy: Clostridioides difficile
• 16S sequence: AB632386
• Sequence Identity:
• Total samples: 39293
• soil counts: 528
• aquatic counts: 1013
• animal counts: 37560
• plant counts: 192

Sequence information

16S sequences

• @ref: 67770
• description: [Clostridium] difficile gene for 16S ribosomal RNA, partial sequence, strain: JCM 5256
• accession: AB632386
• length: 1464
• database: nuccore
• NCBI tax ID: 1496

External links

@ref: 67770

culture collection no.: JCM 5256

Reference