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BacDive ID 165242
Type strain
Culture col. no. JCM 5465
NCBI tax ID(s) 1118458
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 9.2 (current version):
version 9.2 (current version)

General

@ref: 67770

BacDive-ID: 165242

keywords: 16S sequence, Bacteria, mesophilic

description: Pseudomonas sp. JCM 5465 is a mesophilic bacterium that was isolated from Chicken.

NCBI tax id

  • NCBI tax id: 1118458
  • Matching level: species

strain history

  • @ref: 67770
  • history: P.-P. Chang 156.

doi: 10.13145/bacdive165242.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas sp.
  • full scientific name: Pseudomonas Migula 1894 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Flavimonas
    20215Serpens
    20215Chryseomonas
    20215Zestomonas
    20215Phytopseudomonas
    20215Caenipseudomonas
    20215Aquipseudomonas
    20215Ectopseudomonas
    20215Metapseudomonas
    20215Geopseudomonas

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas sp.

full scientific name: Pseudomonas sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 30

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Chicken

taxonmaps

  • @ref: 69479
  • File name: preview.99_199.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_61;97_89;98_98;99_199&stattab=map
  • Last taxonomy: Pseudomonas
  • 16S sequence: AB685672
  • Sequence Identity:
  • Total samples: 8172
  • soil counts: 874
  • aquatic counts: 1631
  • animal counts: 3216
  • plant counts: 2451

Sequence information

16S sequences

  • @ref: 67770
  • description: Pseudomonas sp. JCM 5465 gene for 16S ribosomal RNA, partial sequence
  • accession: AB685672
  • length: 1459
  • database: nuccore
  • NCBI tax ID: 1118458

External links

@ref: 67770

culture collection no.: JCM 5465

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/