@ref: 20215
BacDive-ID: 170015
keywords: genome sequence, 16S sequence
description: Lysobacter selenitireducens 13A is a prokaryote of the family Lysobacteraceae.
doi: 10.13145/bacdive170015.20251217.10
@ref: 20215
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Lysobacterales
family: Lysobacteraceae
genus: Lysobacter
species: Lysobacter selenitireducens
full scientific name: Lysobacter selenitireducens Mao et al. 2022
strain designation: 13A
type strain: yes
| @ref | gram stain | confidence |
|---|---|---|
| 125438 | negative | 99.23 |
| 125439 | negative | 96.5 |
| @ref | spore formation | confidence |
|---|---|---|
| 125439 | no | 94.3 |
| 125438 | no | 91.376 |
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 99.23 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 98.495 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 84.182 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 91.376 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 89.899 | no |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 53.231 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 94.3 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | yes | 74.8 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | negative | 96.5 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | obligate aerobe | 99.2 |
@ref: 20215
culture collection no.: JCM 34786, GDMCC 1.2722
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG |
| 126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer | StrainInfo—the central database for linked microbial strain identifiers | 10.1093/database/baaf059 |
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