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BacDive ID 172336
Type strain
Culture col. no. CRBIP19.103
NCBI tax ID(s) 562
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 118368

BacDive-ID: 172336

keywords: mesophilic, Gram-negative, rod-shaped

description: Escherichia coli CRBIP19.103 is a mesophilic, Gram-negative, rod-shaped prokaryote of the family Enterobacteriaceae.

NCBI tax id

  • NCBI tax id: 562
  • Matching level: species

strain history

  • @ref: 118368
  • history: CIP <- 2007, JM. Ghigo, Institut Pasteur, Paris, France: strain TG1ΔdinI::Km

doi: 10.13145/bacdive172336.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Escherichia
  • species: Escherichia coli
  • full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacillus coli

@ref: 118368

domain: Bacteria

phylum: Pseudomonadota

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Escherichia

species: Escherichia coli

type strain: no

Morphology

cell morphology

  • @ref: 118368
  • gram stain: negative
  • cell shape: rod-shaped

Culture and growth conditions

culture medium

@refnamegrowthlink
118368Luria-Bertani Mediumyes
118368CIP Medium 1085yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=1085

culture temp

  • @ref: 118368
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836817632nitrate-reduction
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836817634D-glucose-fermentation
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinno
6836816301nitriteno
6836816136hydrogen sulfideno
6836817997dinitrogenno
6836835581indoleno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68368lysine decarboxylase-4.1.1.18
68368ornithine decarboxylase-4.1.1.17
68368urease-3.5.1.5
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase-3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUINOSorRHASACMELNO2N2
118368-------------------

Interaction and safety

risk assessment

  • @ref: 118368
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Literature

@ref: 118368

culture collection no.: CRBIP19.103

straininfo link

  • @ref: 126262
  • straininfo: 373267

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
68368Automatically annotated from API 20E
118368Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CRBIP19.103Collection of Institut Pasteur (CRBIP19.103)
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059