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BacDive ID 174353
Type strain
Strain Designation PD1_1
Culture col. no. DSM 110495 PD1_1
NCBI tax ID(s) 1402
Links
For citation purpose refer to the digital object identifier (doi) of the current version.

Archive

version 10 (current version):
version 10 (current version)

General

@ref: 124063

BacDive-ID: 174353

DSM-Number: 110495

keywords: 16S sequence

description: Bacillus licheniformis PD1_1 is a prokaryote that was isolated from Rock scraping.

NCBI tax id

  • NCBI tax id: 1402
  • Matching level: species

strain history

  • @ref: 124063
  • history: <- S. Gebhard, University of Bath <- B. Reeksting, University of Bath; PD1_1

doi: 10.13145/bacdive174353.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/bacillati
  • keyword: phylum/bacillota
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus licheniformis
  • full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Clostridium licheniforme

@ref: 124063

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Bacillaceae

genus: Bacillus

species: Bacillus licheniformis

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901

strain designation: PD1_1

type strain: no

Culture and growth conditions

culture medium

  • @ref: 124063
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 124063
  • growth: positive
  • type: growth
  • temperature: 28

Isolation, sampling and environmental information

isolation

  • @ref: 124063
  • sample type: Rock scraping
  • geographic location: Falmouth, Cornwall
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

Interaction and safety

risk assessment

  • @ref: 124063
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 124063
  • description: Bacillus licheniformis strain PD1_1 16S ribosomal RNA gene, partial sequence
  • accession: MN410554
  • length: 937
  • database: nuccore
  • NCBI tax ID: 1402

Literature

@ref: 124063

culture collection no.: DSM 110495

straininfo link

  • @ref: 126262
  • straininfo: 283111

literature

topicPubmed-IDtitleauthorsjournalDOIyearmesh
Metabolism31980427In-Depth Profiling of Calcite Precipitation by Environmental Bacteria Reveals Fundamental Mechanistic Differences with Relevance to Application.Reeksting BJ, Hoffmann TD, Tan L, Paine K, Gebhard S.Appl Environ Microbiol10.1128/aem.02739-192020Bacillus, Ureolysis, Microbially Induced Calcite Precipitation, Self-healing Concrete, metabolism, metabolism, Environmental Microbiology
Metabolism40176297Metabolic Insights Into Microbially Induced Calcite Formation by Bacillaceae for Application in Bio-Based Construction Materials.Seidel M, Hamley-Bennett C, Reeksting BJ, Bagga M, Hellmann L, Hoffmann TD, Kraemer C, Ofiteru ID, Paine K, Gebhard S.Environ Microbiol10.1111/1462-2920.700932025Acetate Metabolism, Micp, Calcium Detoxification, Bacillaceae, Calcium Carbonate, Construction Materials

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
124063Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-110495Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 110495)
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. ReimerStrainInfo—the central database for linked microbial strain identifiers10.1093/database/baaf059