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BacDive ID 307
Type strain
Culture col. no. DSM 26102 CCUG 56600
NCBI tax ID(s) 85698
Links
version 10 (current version)

General

@ref: 18161

BacDive-ID: 307

DSM-Number: 26102

keywords: aerobe, mesophilic

description: Achromobacter xylosoxidans subsp. xylosoxidans DSM 26102 is an aerobe, mesophilic prokaryote that was isolated from human sputum, 34-year old cystic fibrosis patient, female.

NCBI tax id

  • NCBI tax id: 85698
  • Matching level: species

strain history

  • @ref: 18161
  • history: <- CCUG <- I. Adlerberth

doi: 10.13145/bacdive307.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Achromobacter
  • species: Achromobacter xylosoxidans subsp. xylosoxidans
  • full scientific name: Achromobacter xylosoxidans subsp. xylosoxidans (Yabuuchi and Yano 1981 ex Yabuuchi and Ohyama 1971) Yabuuchi et al. 1998
  • synonyms

    • @ref: 20215
    • synonym: Alcaligenes xylosoxidans subsp. xylosoxidans

@ref: 18161

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Achromobacter

species: Achromobacter xylosoxidans subsp. xylosoxidans

full scientific name: Achromobacter xylosoxidans subsp. xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi et al. 1998

type strain: no

Morphology

colony morphology

  • @ref: 18161
  • type of hemolysis: gamma
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
18161COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
18161CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

@refgrowthtypetemperature
18161positivegrowth37
18161positivegrowth30
61036positivegrowth37

Physiology and metabolism

oxygen tolerance

  • @ref: 61036
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
18161catalase+1.11.1.6
18161cytochrome-c oxidase+1.9.3.1
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
18161+-------+-+/----+++++++

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentsampling date
18161human sputum, 34-year old cystic fibrosis patient, femaleGöteborgSwedenSWEEurope
61036Human sputum,34-yr-old woman,cystic fibrosisGöteborgSwedenSWEEurope2008-06-11

isolation source categories

Cat1Cat2Cat3
#Infection#Disease#Cystic fibrosis
#Infection#Patient
#Host#Human#Female
#Host Body Product#Fluids#Sputum

Interaction and safety

risk assessment

  • @ref: 18161
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Literature

@ref: 18161

culture collection no.: DSM 26102, CCUG 56600

straininfo link

  • @ref: 126262
  • straininfo: 402860

Reference

@idauthorscataloguedoi/urltitle
18161Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26102)https://www.dsmz.de/collection/catalogue/details/culture/DSM-26102
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
61036Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 56600)https://www.ccug.se/strain?id=56600
68369Automatically annotated from API 20NE
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer10.1093/database/baaf059StrainInfo—the central database for linked microbial strain identifiers