@ref: 3018
BacDive-ID: 4655
DSM-Number: 7144
keywords: mesophilic
description: Escherichia coli K12 AB1621 is a mesophilic prokaryote of the family Enterobacteriaceae.
doi: 10.13145/bacdive4655.20251217.10
@ref: 3018
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919
strain designation: K12 AB1621
type strain: no
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68368 | 30849 | L-arabinose | - | fermentation |
| 68368 | 27613 | amygdalin | - | fermentation |
| 68368 | 28053 | melibiose | - | fermentation |
| 68368 | 17992 | sucrose | - | fermentation |
| 68368 | 62345 | L-rhamnose | + | fermentation |
| 68368 | 30911 | sorbitol | + | fermentation |
| 68368 | 17268 | myo-inositol | - | fermentation |
| 68368 | 16899 | D-mannitol | - | fermentation |
| 68368 | 17634 | D-glucose | + | fermentation |
| 68368 | 5291 | gelatin | - | hydrolysis |
| 68368 | 27897 | tryptophan | + | energy source |
| 68368 | 16199 | urea | - | hydrolysis |
| 68368 | 16947 | citrate | - | assimilation |
| 68368 | 18257 | ornithine | - | degradation |
| 68368 | 25094 | lysine | + | degradation |
| 68368 | 29016 | arginine | - | hydrolysis |
| @ref | Chebi-ID | metabolite | production |
|---|---|---|---|
| 68368 | 15688 | acetoin | no |
| 68368 | 35581 | indole | yes |
| 68368 | 16136 | hydrogen sulfide | no |
| @ref | Chebi-ID | metabolite | voges-proskauer-test | indole test |
|---|---|---|---|---|
| 68368 | 15688 | acetoin | - | |
| 68368 | 35581 | indole | + |
| @ref | value | activity | ec |
|---|---|---|---|
| 68368 | urease | - | 3.5.1.5 |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 |
| 68368 | cytochrome oxidase | - | 1.9.3.1 |
| 68368 | gelatinase | - | |
| 68368 | tryptophan deaminase | - | 4.1.99.1 |
| 68368 | lysine decarboxylase | + | 4.1.1.18 |
| 68368 | arginine dihydrolase | - | 3.5.3.6 |
| 68368 | beta-galactosidase | + | 3.2.1.23 |
| @ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3018 | + | - | + | - | - | - | - | - | + | - | - | + | - | - | + | + | - | - | - | - | |
| 3018 | + | - | + | - | - | - | - | - | + | - | - | + | - | - | + | + | - | - | - | - | - |
@ref: 3018
culture collection no.: DSM 7144, ATCC 25290
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Metabolism | 2667464 | Use of a novel air separation system in a fed-batch fermentative culture of Escherichia coli. | Fass R, Clem TR, Shiloach J. | Appl Environ Microbiol | 10.1128/aem.55.5.1305-1307.1989 | 1989 | growth & development, metabolism, Fermentation | |
| Enzymology | 4590469 | Superoxide dismutase and oxygen toxicity in a eukaryote. | Gregory EM, Goscin SA, Fridovich I. | J Bacteriol | 10.1128/jb.117.2.456-460.1974 | 1974 | enzymology, Oxygen, metabolism | Metabolism |
| Metabolism | 12874338 | Diminished adhesion of Anaplasma phagocytophilum-infected neutrophils to endothelial cells is associated with reduced expression of leukocyte surface selectin. | Choi KS, Garyu J, Park J, Dumler JS. | Infect Immun | 10.1128/iai.71.8.4586-4594.2003 | 2003 | immunology, microbiology, immunology, microbiology, pathogenicity, physiology, metabolism, metabolism, physiology | |
| 14576099 | Synthesis, degradation, and antimicrobial properties of targeted macromolecular prodrugs of norfloxacin. | Roseeuw E, Coessens V, Balazuc AM, Lagranderie M, Chavarot P, Pessina A, Neri MG, Schacht E, Marchal G, Domurado D. | Antimicrob Agents Chemother | 10.1128/aac.47.11.3435-3441.2003 | 2003 | chemical synthesis, pharmacology, chemical synthesis, pharmacology, chemical synthesis, pharmacology | ||
| Metabolism | 25261511 | Thiouracil-Forming Bacteria Identified and Characterized upon Porcine In Vitro Digestion of Brassicaceae Feed. | Kiebooms JA, Wauters J, Vanden Bussche J, Houf K, De Vos P, Van Trappen S, Cleenwerck I, Vanhaecke L. | Appl Environ Microbiol | 10.1128/aem.02370-14 | 2014 | microbiology, metabolism, metabolism, metabolism, Digestion, metabolism |
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 3018 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7144) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-7144 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 68368 | Automatically annotated from API 20E | |||
| 126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer | 10.1093/database/baaf059 | StrainInfo—the central database for linked microbial strain identifiers |
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