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BacDive ID 4837
Type strain
Strain Designation Z40, A178
Culture col. no. DSM 10780 Z40 A178
NCBI tax ID(s) 562
Links
version 10 (current version)

General

@ref: 4111

BacDive-ID: 4837

DSM-Number: 10780

keywords: mesophilic, human pathogen

description: Escherichia coli Z40 is a mesophilic human pathogen that was isolated from Patient with urinary tract infection.

NCBI tax id

  • NCBI tax id: 562
  • Matching level: species

strain history

  • @ref: 4111
  • history: <- M. Achtman, A178

doi: 10.13145/bacdive4837.20251217.10

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: kingdom/pseudomonadati
  • keyword: phylum/pseudomonadota
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Escherichia
  • species: Escherichia coli
  • full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacillus coli

@ref: 4111

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Enterobacteriaceae

genus: Escherichia

species: Escherichia coli

full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919

strain designation: Z40, A178

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
4111TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
4111COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

culture temp

  • @ref: 4111
  • growth: positive
  • type: growth
  • temperature: 37

Isolation, sampling and environmental information

isolation

  • @ref: 4111
  • sample type: Patient with urinary tract infection
  • geographic location: Seattle, Washington
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

Cat1Cat2
#Infection#Disease
#Infection#Patient
#Host Body-Site#Urogenital tract

Interaction and safety

risk assessment

  • @ref: 4111
  • pathogenicity human: yes
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Literature

@ref: 4111

culture collection no.: DSM 10780

straininfo link

  • @ref: 126262
  • straininfo: 48924

Reference

@idauthorscataloguedoi/urltitle
4111Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10780)https://www.dsmz.de/collection/catalogue/details/culture/DSM-10780
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
126262A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer10.1093/database/baaf059StrainInfo—the central database for linked microbial strain identifiers