Cite this strain

Nocardia calcarea (DSM 20665, ATCC 27854, LMG 16262)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10863

Type strain

Culture col. no. DSM 20665 ATCC 27854 LMG 16262 KCTC 3483 CCM 2769 1 more

NCBI tax ID(s) 1833

Special Collections DSMZ JCM KCTC

Links

Name and taxonomic classification

Nocardia calcarea DSM 20665 is a mesophilic bacterium that was isolated from soil.

mesophilic 16S sequence Bacteria

SI-ID 8183

LMG 16262, ATCC 27854, CCM 2769, DSM 20665, JCM 11573, IMET 11248, KCTC 3483

Last LPSN update 2024-12-09 10:44:18

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Nocardia

Species Nocardia calcarea

Full scientific name Nocardia calcarea Metcalfe and Brown 1957 (Approved Lists 1980)

Synonyms (1)

Arthrobacter picolinophilus

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8989	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8989	positive	growth	28-37	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Observation

67770

Observationquinones: MK-8(H₂)

Compound production

@ref	Compound
8989	picolinic acid hydrolase
20216	Picolinic acid hydrolase
67770	Picolinic acid hydroxylase

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type
8989	soil
67770	Soil

Safety information

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
8989	yes, in single cases	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

@ref	GC-content (mol%)	Method
67770	65.2	thermal denaturation, midpoint method (Tm)

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Rhodococcus erythropolis DSM 20665 16S ribosomal RNA gene, partial sequence	AY017116	625		1833

Genome-based predictions

External links

Straininfo Link

@ref	Straininfo	Culture collections
80119	8183	LMG 16262, ATCC 27854, CCM 2769, DSM 20665, JCM 11573, IMET 11248, KCTC 3483

Culture collection no.

Culture collection no.
DSM 20665
ATCC 27854
LMG 16262
KCTC 3483
CCM 2769
JCM 11573

References

#8989	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20665
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) . Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#80119	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID8183.1 )

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