Cite this strain

Oxalophagus oxalicus (DSM 5503, Alt Ox1)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11458

Type strain

Culture col. no. DSM 5503 Alt Ox1

NCBI tax ID(s) 36848

Special Collections DSMZ

Links

Name and taxonomic classification

Oxalophagus oxalicus DSM 5503 is an anaerobe, mesophilic bacterium that was isolated from freshwater mud.

anaerobe mesophilic 16S sequence Bacteria

SI-ID 47936

DSM 5503, ATCC 49686

Last LPSN update 2024-12-09 10:44:22

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Oxalophagus

Species Oxalophagus oxalicus

Full scientific name Oxalophagus oxalicus (Dehning and Schink 1990) Collins et al. 1994

Synonyms (1)

Clostridium oxalicum

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link
2085	OXALOPHAGUS MEDIUM (DSMZ Medium 194b)		Medium recipe provided by DSMZ

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
2085	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

2085

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Freshwater
#Environmental	#Terrestrial	#Mud (Sludge)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
2085	freshwater mud	creek near Tübingen	Germany	DEU	Europe

Safety information

Risk assessment

@ref	Biosafety level	Biosafety level comment
2085	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

2085

GC-content (mol%)36.3

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Oxalophagus oxalicus 16S rRNA gene, strain DSM 5503	X77840	1518		36848
2085	Oxalophagus oxalicus 16S rRNA gene, strain DSM 5503	Y14581	1497		36848

Genome-based predictions

External links

Straininfo Link

@ref	Straininfo	Culture collections
80695	47936	DSM 5503, ATCC 49686

Culture collection no.

Culture collection no.
DSM 5503
Alt Ox1

References

#2085	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5503
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#80695	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47936.1 )

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