Cite this strain

(DSM 12896, CH 1285, E231b)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130753

Type strain

Strain Designation CH 1285, E231b

Culture col. no. DSM 12896 CH 1285 E231b

NCBI tax ID(s) 678

Special Collections DSMZ

Links

Name and taxonomic classification

CH 1285 is a bacterium that was isolated from aborted foetus of cattle.

Bacteria

SI-ID 405793

DSM 12896

Last LPSN update 2024-12-09 10:48:58

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order "Vibrionales"

Family Vibrionaceae

Genus Vibrio

Full scientific name Vibrio Pacini 1854 (Approved Lists 1980)

Synonyms (3)

Beneckea
Lucibacterium
Allomonas

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link
21967	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe provided by DSMZ
21967	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe provided by DSMZ

Culture temp

@ref	Growth	Type	Temperature (°C)
21967	positive	growth	30

Physiology and metabolism

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
21967	-	-	-	-	-	+	-	+	+	+	-	+	+	+	+	-	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Bovinae (Cow, Cattle)

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
21967	aborted foetus of cattle	Germany	DEU	Europe

Safety information

Sequence information

Genome-based predictions

External links

Straininfo Link

@ref	Straininfo	Culture collections
89250	405793	DSM 12896

Culture collection no.

Culture collection no.
DSM 12896
CH 1285
E231b

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21967	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12896
#68369	Automatically annotated from API 20NE .
#89250	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405793.1 )

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