Cite this strain

Roseomonas terrae (KCTC 12874, JCM 14592, DS-48)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134265

Type strain

Strain Designation DS-48

Culture col. no. KCTC 12874 JCM 14592 DS-48

NCBI tax ID(s) 424799

Special Collections JCM KCTC Literature strains

Links

Name and taxonomic classification

Roseomonas terrae DS-48 is an aerobe, Gram-negative, ovoid-shaped bacterium that was isolated from soil.

Gram-negative ovoid-shaped aerobe 16S sequence Bacteria

SI-ID 319389

JCM 14592, KCTC 12874

Last LPSN update 2024-12-09 10:49:21

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Roseomonas

Species Roseomonas terrae

Full scientific name Roseomonas terrae Yoon et al. 2007

Synonyms (1)

Neoroseomonas terrae

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
32202	negative	1.8 µm	0.75 µm	ovoid-shaped
67771	negative

Pigmentation

32202

Productionno

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
32202	positive	growth	10-36
32202	positive	optimum	25
67770	positive	growth	25
67771	positive	growth	25

Culture pH

@ref	Ability	Type	PH
32202	positive	optimum	7.5
32202	positive	growth	5.5-10.5

Physiology and metabolism

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32202	NaCl	positive	growth	0-1.0 %
32202	NaCl	positive	optimum	0.5 %

Observation

@ref	Observation
67770	quinones: Q-10
67771	quinones: Q-10

Spore formation

32202

Spore formationno

Enzymes

@ref	Value	Activity	Ec
32202	acid phosphatase	+	3.1.3.2
32202	alkaline phosphatase	+	3.1.3.1
32202	catalase	+	1.11.1.6
32202	cytochrome oxidase	+	1.9.3.1
32202	urease	+	3.5.1.5

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32202	53424 ChEBI	tween 20	+	carbon source
32202	16199 ChEBI	urea	+	carbon source

Oxygen tolerance

@ref	Oxygen tolerance
32202	aerobe
67771	aerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type
32202	soil
67770	Soil
67771	From soil

Taxonmaps

69479

Global distribution of 16S sequence EF363716 (>99% sequence identity) for Roseomonas terrae from Microbeatlas

Aquatic Samples	96
Soil Samples	411
Animal Samples	44
Plant Samples	33
Total Samples	584

Safety information

Sequence information

GC content

@ref	GC-content (mol%)	Method
67770	69.3	high performance liquid chromatography (HPLC)
67771	69.3

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
32202	Roseomonas terrae strain DS-48 16S ribosomal RNA gene, partial sequence	EF363716	1442		424799

Genome-based predictions

External links

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas rubea sp. nov., isolated from rice paddy soil.	Lee HJ, Whang KS	Int J Syst Evol Microbiol	10.1099/ijsem.0.005251	2022
Phylogeny	Roseomonas arctica sp. nov., isolated from arctic glacial foreland soil.	Qiu X, Qu Z, Jiang F, Lin Y, Zhang Y, Chang X, Da X, Deng S, Kim M, Fang C, Peng F	Int J Syst Evol Microbiol	10.1099/ijsem.0.000857	2015
Phylogeny	Roseomonas eburnea sp. nov., isolated from activated sludge.	Wang C, Deng S, Liu X, Yao L, Shi C, Jiang J, Kwon SW, He J, Li J	Int J Syst Evol Microbiol	10.1099/ijsem.0.000728	2015
Phylogeny	Roseomonas oryzicola sp. nov., isolated from the rhizosphere of rice (Oryza sativa L.).	Chung EJ, Yoon HS, Kim KH, Jeon CO, Chung YR	Int J Syst Evol Microbiol	10.1099/ijsem.0.000656	2015
Phylogeny	Roseomonas alkaliterrae sp. nov., isolated from an alkali geothermal soil sample in Tengchong, Yunnan, South-West China.	Dong L, Ming H, Yin YR, Duan YY, Zhou EM, Nie GX, Feng HG, Liu L, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-014-0144-1	2014
Phylogeny	Roseomonas soli sp. nov., isolated from an agricultural soil cultivated with Chinese cabbage (Brassica campestris).	Kim DU, Ka JO	Int J Syst Evol Microbiol	10.1099/ijs.0.053827-0	2013
Phylogeny	Roseomonas sediminicola sp. nov., isolated from fresh water.	He D, Kim JK, Jiang XY, Park HY, Sun C, Yu HS, Yoon MH, Kim SC, Jin FX, Im WT	Antonie Van Leeuwenhoek	10.1007/s10482-013-0065-4	2013
Phylogeny	Roseomonas terrae sp. nov.	Yoon JH, Kang SJ, Oh HW, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.65113-0	2007

Straininfo Link

@ref	Straininfo	Culture collections
91852	319389	JCM 14592, KCTC 12874

Culture collection no.

Culture collection no.
KCTC 12874
JCM 14592
DS-48

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#32202	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28444 (see below)
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#91852	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID319389.1 )

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