Cite this strain

Kineococcus gynurae (TISTR 1856, NRRL B-24568, BCC 26245)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134344

Type strain

Strain Designation KKD096

Culture col. no. TISTR 1856 NRRL B-24568 BCC 26245 NBRC 103943 KKD096 2 more

NCBI tax ID(s) 452979

Special Collections JCM Literature strains

Links

Name and taxonomic classification

Kineococcus gynurae KKD096 is an aerobe, Gram-positive, motile bacterium that was isolated from plant roots.

Gram-positive motile coccus-shaped aerobe 16S sequence Bacteria

Culture Collection Numbers

TISTR 1856 NRRL B-24568 BCC 26245 NBRC 103943 KKD096 KACC 14421 JCM 15972

Last LPSN update 2024-12-09 10:49:21

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kineosporiales

Family Kineosporiaceae

Genus Kineococcus

Species Kineococcus gynurae

Full scientific name Kineococcus gynurae Duangmal et al. 2008

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
32549	positive	coccus-shaped

Pigmentation

32549

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
32549	positive	growth	14-34
32549	positive	optimum	25-28
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH
32549	positive	optimum	06-07
32549	positive	growth	05-09

Physiology and metabolism

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32549	NaCl	positive	growth	01-07 %
32549	NaCl	positive	optimum	01-05 %

Observation

@ref	Observation
32549	aggregates in chains
67770	quinones: MK-9(H₂)

Spore formation

32549

Spore formationno

Enzymes

@ref	Value	Activity	Ec
32549	catalase	+	1.11.1.6
32549	urease	+	3.5.1.5

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32549	28757 ChEBI	fructose	+	carbon source
32549	28260 ChEBI	galactose	+	carbon source
32549	17234 ChEBI	glucose	+	carbon source
32549	18403 ChEBI	L-arabitol	+	carbon source
32549	17716 ChEBI	lactose	+	carbon source
32549	17306 ChEBI	maltose	+	carbon source
32549	29864 ChEBI	mannitol	+	carbon source
32549	37684 ChEBI	mannose	+	carbon source
32549	28053 ChEBI	melibiose	+	carbon source
32549	26546 ChEBI	rhamnose	+	carbon source
32549	30911 ChEBI	sorbitol	+	carbon source
32549	17992 ChEBI	sucrose	+	carbon source
32549	27082 ChEBI	trehalose	+	carbon source

Oxygen tolerance

32549

Oxygen toleranceaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Plants
#Host Body-Site	#Plant

Isolation

@ref	Sample type
32549	plant roots
67770	Roots of Gynura pseudochina var. hispida from Bangkok

Taxonmaps

69479

Global distribution of 16S sequence EF667339 (>99% sequence identity) for Kineococcus gynurae subclade from Microbeatlas

Aquatic Samples	94
Soil Samples	127
Animal Samples	398
Plant Samples	120
Total Samples	739

Safety information

Sequence information

GC content

@ref	GC-content (mol%)
32549	73.3
67770	73.3

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
32549	Kineococcus sp. KKD096 16S ribosomal RNA gene, partial sequence	EF667339	1351		452979
124043	Kineococcus gynurae gene for 16S rRNA, partial sequence.	AB522099	1473		452979

Genome-based predictions

External links

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Kineococcus endophytica sp. nov., a novel endophytic actinomycete isolated from a coastal halophyte in Jiangsu, China.	Bian GK, Feng ZZ, Qin S, Xing K, Wang Z, Cao CL, Liu CH, Dai CC, Jiang JH	Antonie Van Leeuwenhoek	10.1007/s10482-012-9757-4	2012
Phylogeny	Kineococcus gynurae sp. nov., isolated from a Thai medicinal plant.	Duangmal K, Thamchaipenet A, Ara I, Matsumoto A, Takahashi Y	Int J Syst Evol Microbiol	10.1099/ijs.0.65671-0	2008

Culture collection no.

Culture collection no.
TISTR 1856
NRRL B-24568
BCC 26245
NBRC 103943
KKD096
KACC 14421
JCM 15972

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#32549	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28767 (see below)
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

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Kineococcus gynurae (TISTR 1856, NRRL B-24568, BCC 26245)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Halophily

Observation

Spore formation

Enzymes

Metabolite utilization

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Safety information

Sequence information

GC content

16S sequences

Genome-based predictions

External links

Literature

Culture collection no.

References

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