Cite this strain

Limimaricola hongkongensis (DSM 17493, JCM 12480, NRRL B-41040)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13676

Type strain

Strain Designation UST950701-009W

Culture col. no. DSM 17493 JCM 12480 NRRL B-41040 UST950701-009W

NCBI tax ID(s) 278132

Special Collections DSMZ JCM

Links

Name and taxonomic classification

Limimaricola hongkongensis UST950701-009W is a mesophilic bacterium that was isolated from 7-day-old marine biofilm.

mesophilic 16S sequence Bacteria

SI-ID 231906

JCM 12480, NRRL B-41040, DSM 17493

Last LPSN update 2024-12-09 10:44:36

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Roseobacteraceae

Genus Limimaricola

Species Limimaricola hongkongensis

Full scientific name Limimaricola hongkongensis (Lau et al. 2004) Wirth and Whitman 2018

Synonyms (1)

Loktanella hongkongensis

BacDive ID	Other strains from **Limimaricola hongkongensis** (1)	Type strain
13675	L. hongkongensis UST950701-009P, DSM 17492, JCM 12479, NRRL ... (type strain)

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7020	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
7020	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Biofilm	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
7020	7-day-old marine biofilm	Hong Kong	HKG	Asia
67770	Marine biofilm in Hong Kong waters

Taxonmaps

69479

Global distribution of 16S sequence AY600301 (>99% sequence identity) for Limimaricola from Microbeatlas

Aquatic Samples	3059
Soil Samples	214
Animal Samples	378
Plant Samples	76
Total Samples	3727

Safety information

Risk assessment

@ref	Biosafety level	Biosafety level comment
7020	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

@ref	GC-content (mol%)	Method
67770	65.8-66.6	high performance liquid chromatography (HPLC)

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7020	Loktanella hongkongensis strain UST950701-009W 16S ribosomal RNA gene, partial sequence	AY600301	1336		278132

Genome-based predictions

External links

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Loktanella hongkongensis sp. nov., a novel member of the alpha-Proteobacteria originating from marine biofilms in Hong Kong waters.	Lau SCK, Tsoi MMY, Li X, Plakhotnikova I, Wu M, Wong PK, Qian PY	Int J Syst Evol Microbiol	10.1099/ijs.0.63294-0	2004

Straininfo Link

@ref	Straininfo	Culture collections
82859	231906	JCM 12480, NRRL B-41040, DSM 17493

Culture collection no.

Culture collection no.
DSM 17493
JCM 12480
NRRL B-41040
UST950701-009W

References

#7020	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17493
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#82859	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID231906.1 )

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