Cite this strain

Salinicoccus salsiraiae (DSM 19496, CIP 108576, LMG 22840)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14429

Type strain

Culture col. no. DSM 19496 CIP 108576 LMG 22840

NCBI tax ID(s) 365049

Special Collections DSMZ CIP

Links

Name and taxonomic classification

Salinicoccus salsiraiae DSM 19496 is a mesophilic bacterium that was isolated from salted skate .

mesophilic 16S sequence Bacteria

SI-ID 133655

LMG 22840, CIP 108576, DSM 19496

Last LPSN update 2024-12-09 10:44:42

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Staphylococcaceae

Genus Salinicoccus

Species Salinicoccus salsiraiae

Full scientific name Salinicoccus salsiraiae França et al. 2007

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8119	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8119	positive	growth	28	mesophilic

Physiology and metabolism

Murein

@ref	Murein short key	Type
8119	A11.02	A3alpha L-Lys-Gly_5-6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Invertebrates (Other)	#Tunicata
#Condition	#Saline	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
8119	salted skate (Raja)	Portugal	PRT	Europe

Taxonmaps

69479

Global distribution of 16S sequence DQ333949 (>99% sequence identity) for Salinicoccus from Microbeatlas

Aquatic Samples	331
Soil Samples	348
Animal Samples	1510
Plant Samples	166
Total Samples	2355

Safety information

Risk assessment

@ref	Biosafety level	Biosafety level comment
8119	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

8119

GC-content (mol%)46.2

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8119	Salinicoccus salsiraiae strain RH-1 16S ribosomal RNA gene, partial sequence	DQ333949	1505		365049

Genome-based predictions

External links

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Salinicoccus kunmingensis sp. nov., a moderately halophilic bacterium isolated from a salt mine in Yunnan, south-west China.	Chen YG, Cui XL, Pukall R, Li HM, Yang YL, Xu LH, Wen ML, Peng Q, Jiang CL	Int J Syst Evol Microbiol	10.1099/ijs.0.64783-0	2007
Metabolism	Salinicoccus salsiraiae sp. nov.: a new moderately halophilic gram-positive bacterium isolated from salted skate.	Franca L, Rainey FA, Nobre MF, da Costa MS	Extremophiles	10.1007/s00792-006-0532-1	2006

Straininfo Link

@ref	Straininfo	Culture collections
83573	133655	LMG 22840, CIP 108576, DSM 19496

Culture collection no.

Culture collection no.
DSM 19496
CIP 108576
LMG 22840

References

#8119	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19496
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#83573	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID133655.1 )

Rate our new design

Content

About us