Cite this strain

Vibrio mimicus (CCUG 34899)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 148145

Type strain

Culture col. no. CCUG 34899

NCBI tax ID(s) 674

Special Collections CCUG

Links

Name and taxonomic classification

Vibrio mimicus CCUG 34899 is a bacterium that was isolated from Water,Elbe river.

Bacteria

SI-ID 58279

CCUG 34899

Last LPSN update 2024-12-09 10:50:53

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order "Vibrionales"

Family Vibrionaceae

Genus Vibrio

Species Vibrio mimicus

Full scientific name Vibrio mimicus Davis et al. 1982

BacDive ID	Other strains from **Vibrio mimicus** (20)	Type strain
17324	V. mimicus 1721-77, DSM 19130, ATCC 33653, CCM 4552, ... (type strain)
136567	V. mimicus 161, 269-80, CIP 106921, ATCC 33654
138390	V. mimicus 284, CIP 106975
142587	V. mimicus CCUG 13169
142588	V. mimicus CCUG 13170
142589	V. mimicus CCUG 13171
142590	V. mimicus CCUG 13172
142591	V. mimicus CCUG 13173
142592	V. mimicus CCUG 13174 A
142593	V. mimicus CCUG 13174 B
142594	V. mimicus CCUG 13174 C
142595	V. mimicus CCUG 13175
142596	V. mimicus CCUG 13176
148142	V. mimicus CCUG 34896
148143	V. mimicus CCUG 34897
148144	V. mimicus CCUG 34898
150319	V. mimicus CCUG 39638
151360	V. mimicus CCUG 43851 A
151361	V. mimicus CCUG 43851 B
152949	V. mimicus CCUG 48106

Morphology

Culture and growth conditions

Physiology and metabolism

Enzymes

@ref	Value	Activity	Ec
68374	alpha-galactosidase	-	3.2.1.22	from API ID32E
68374	alpha-glucosidase	-	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68374	arginine dihydrolase	-	3.5.3.6	from API ID32E
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68374	beta-galactosidase	+	3.2.1.23	from API ID32E
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68374	beta-glucosidase	-	3.2.1.21	from API ID32E
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
68368	cytochrome oxidase	+	1.9.3.1	from API 20E
68368	gelatinase	+		from API 20E
68374	L-aspartate arylamidase	-	3.4.11.21	from API ID32E
68374	lipase	+		from API ID32E
68374	lysine decarboxylase	-	4.1.1.18	from API ID32E
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68374	ornithine decarboxylase	+	4.1.1.17	from API ID32E
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68374	urease	-	3.5.1.5	from API ID32E
68368	urease	-	3.5.1.5	from API 20E

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68374	35581 ChEBI	indole	from API ID32E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68368	15688 ChEBI	acetoin	-	from API 20E
68374	35581 ChEBI	indole		from API ID32E
68368	35581 ChEBI	indole		from API 20E

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68368	27613 ChEBI	amygdalin	-	fermentation	from API 20E
68374	29016 ChEBI	arginine	-	hydrolysis	from API ID32E
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68374	17057 ChEBI	cellobiose	-	builds acid from	from API ID32E
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68374	18333 ChEBI	D-arabitol	-	builds acid from	from API ID32E
68374	18024 ChEBI	D-galacturonic acid	-	builds acid from	from API ID32E
68374	17634 ChEBI	D-glucose	-	builds acid from	from API ID32E
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68374	16899 ChEBI	D-mannitol	-	builds acid from	from API ID32E
68368	16899 ChEBI	D-mannitol	+	fermentation	from API 20E
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
68374	30849 ChEBI	L-arabinose	-	builds acid from	from API ID32E
68368	30849 ChEBI	L-arabinose	-	fermentation	from API 20E
68374	18403 ChEBI	L-arabitol	-	builds acid from	from API ID32E
68374	62345 ChEBI	L-rhamnose	-	builds acid from	from API ID32E
68368	62345 ChEBI	L-rhamnose	-	fermentation	from API 20E
68374	25094 ChEBI	lysine	-	degradation	from API ID32E
68368	25094 ChEBI	lysine	+	degradation	from API 20E
68374	15792 ChEBI	malonate	-	assimilation	from API ID32E
68374	17306 ChEBI	maltose	-	builds acid from	from API ID32E
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68374	17268 ChEBI	myo-inositol	-	builds acid from	from API ID32E
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
68374	18257 ChEBI	ornithine	+	degradation	from API ID32E
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
68374	18394 ChEBI	palatinose	-	builds acid from	from API ID32E
68374		Potassium 5-ketogluconate	-	builds acid from	from API ID32E
68374	15963 ChEBI	ribitol	-	builds acid from	from API ID32E
68374	30911 ChEBI	sorbitol	-	builds acid from	from API ID32E
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
68374	17992 ChEBI	sucrose	-	builds acid from	from API ID32E
68368	17992 ChEBI	sucrose	-	fermentation	from API 20E
68374	27082 ChEBI	trehalose	-	builds acid from	from API ID32E
68374	27897 ChEBI	tryptophan	+	energy source	from API ID32E
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68374	16199 ChEBI	urea	-	hydrolysis	from API ID32E
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E

Fatty acid profile

Metadata FA analysis

@ref

52393

Fatty acid	Percentage	ECL
C16:1 ω7c	34.2	15.819
C16:0	12.5	16
C18:1 ω7c /12t/9t	11.7	17.824
C16:1 ω7c/C15:0 ISO 2OH	9.4	15.85
C12:0 3OH	9.4	13.455
C14:0 3OH/C16:1 ISO I	6.2	15.485
C14:0	4.7	14
C18:2 ω6,9c/C18:0 ANTE	1.1	17.724
unknown 12.486	1.1	12.486
C16:1 ω9c	1	15.774
C17:1 ω8c	1	16.792
Unidentified	0.9	11.95
C14:0 ISO 3OH	0.6	15.117
C18:1 ω9c	0.6	17.769
C15:0	0.5	15
C17:0	0.5	17
C16:0 iso	0.5	15.626
C12:1 3OH	0.5	13.289
C10:0 3OH	0.5	11.423
Unidentified	0.4	15.278
C13:0 ISO 2OH	0.4	13.814
C18:0	0.4	18
C16:1 ω7c alcohol	0.4	15.386
C13:0 3OH/C15:1 i I/H	0.4	14.469
Unidentified	0.3	10.916
C11:0 3OH	0.3	12.441
Unidentified	0.3	13.861
C16:0 anteiso	0.2	15.717

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
52393	+	-	+	+	+	-	-	-	+	-	+	+	+	-	-	-	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
52393	+	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#River (Creek)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
52393	Water,Elbe river	Hamburg	Germany	DEU	Europe

Safety information

Sequence information

Genome-based predictions

External links

Straininfo Link

@ref	Straininfo	Culture collections
102756	58279	CCUG 34899

Culture collection no.

	Culture collection no.CCUG 34899
	Linkhttps://www.ccug.se/strain?id=34899

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#52393	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 34899
#68368	Automatically annotated from API 20E .
#68374	Automatically annotated from API ID32E .
#102756	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID58279.1 )

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Vibrio mimicus (CCUG 34899)

Name and taxonomic classification

Morphology

Culture and growth conditions