Cite this strain

Inquilinus limosus (CCUG 45997)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 152185

Type strain

Culture col. no. CCUG 45997

NCBI tax ID(s) 171674

Special Collections CCUG

Links

Name and taxonomic classification

Inquilinus limosus CCUG 45997 is an aerobe, mesophilic bacterium that was isolated from Human cystic fibrosis.

aerobe mesophilic Bacteria

SI-ID 110560

CCUG 45997

Last LPSN update 2024-12-09 10:51:21

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Azospirillaceae

Genus Inquilinus

Species Inquilinus limosus

Full scientific name Inquilinus limosus Coenye et al. 2002

BacDive ID	Other strains from **Inquilinus limosus** (4)	Type strain
13941	I. limosus AU476, CIP 108342, CCM 7171, DSM 16000, CCUG ... (type strain)
139881	I. limosus 579896, 103798, DSM 103798
152055	I. limosus CCUG 45650
152058	I. limosus CCUG 45656

Morphology

Colony morphology

57020

Incubation period2 days

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
57020	positive	growth	37	mesophilic

Physiology and metabolism

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	-		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	+	3.4.21.4	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	-	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Oxygen tolerance

57020

Oxygen toleranceaerobe

Fatty acid profile

Metadata FA analysis

@ref

57020

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	48	17.824
C19:0 CYCLO ω8c	10	18.9
C17:0 2OH	7.5	18.249
C18:1 2OH	6	19.088
C18:2 ω6,9c/C18:0 ANTE	5.2	17.724
C17:1 ω6c	5.1	16.862
C18:0 3OH	4.3	19.551
C18:0 2OH	3.9	19.264
C17:0	3.8	17
C16:0 2OH	3.3	17.233
C17:0 3OH	2.8	18.535

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
57020	-	+	+	+	-	+	+	-	+	-	+	+	-	+	+	-	+	+	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
57020	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Human
#Infection	#Disease
#Infection	#Patient

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
57020	Human cystic fibrosis	USA	USA	North America

Safety information

Sequence information

Genome-based predictions

External links

Straininfo Link

@ref	Straininfo	Culture collections
106193	110560	CCUG 45997

Culture collection no.

	Culture collection no.CCUG 45997
	Linkhttps://www.ccug.se/strain?id=45997

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#57020	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45997
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#106193	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID110560.1 )

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Inquilinus limosus (CCUG 45997)

Name and taxonomic classification