Cite this strain

Aggregatibacter actinomycetemcomitans (CCUG 51668)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 153924

Type strain

Culture col. no. CCUG 51668

NCBI tax ID(s) 714

Special Collections CCUG

Links

Name and taxonomic classification

Aggregatibacter actinomycetemcomitans CCUG 51668 is a microaerophile, mesophilic, Gram-negative bacterium that was isolated from Human dental plaque.

Gram-negative microaerophile mesophilic genome sequence 16S sequence Bacteria

SI-ID 303003

CCUG 51668

Last LPSN update 2024-12-09 10:51:33

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pasteurellales

Family Pasteurellaceae

Genus Aggregatibacter

Species Aggregatibacter actinomycetemcomitans

Full scientific name Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006

Synonyms (3)

Haemophilus actinomycetemcomitans
"Bacterium actinomycetemcomitans"
Actinobacillus actinomycetemcomitans

BacDive ID	Other strains from **Aggregatibacter actinomycetemcomitans** (79)	Type strain
11752	A. actinomycetemcomitans DSM 8324, ATCC 33384, CCUG 13227, CIP 52.106, ... (type strain)
11753	A. actinomycetemcomitans DSM 11122, ATCC 29524, NCTC 10982, CDC B5386, ...
11754	A. actinomycetemcomitans Y4, DSM 11123, ATCC 43718, JCM 8578
134882	A. actinomycetemcomitans 663-86, CIP 102682
134903	A. actinomycetemcomitans 711-86, CIP 102729
134913	A. actinomycetemcomitans 736-86, CIP 102748
134997	A. actinomycetemcomitans 82-87, CIP 102839
135028	A. actinomycetemcomitans 167-87, CIP 102906
135633	A. actinomycetemcomitans 4898, CIP 63.30
136040	A. actinomycetemcomitans CIP 52.108
136086	A. actinomycetemcomitans 373-86, CIP 102383
136093	A. actinomycetemcomitans 447-86, CIP 102443
136133	A. actinomycetemcomitans 760-86, CIP 102736
136134	A. actinomycetemcomitans 759-86, CIP 102746
136895	A. actinomycetemcomitans CIP 55.61
137048	A. actinomycetemcomitans 641-86, CIP 102641
137210	A. actinomycetemcomitans 241/50-1, CIP 52.107
137342	A. actinomycetemcomitans 159-87, CIP 102887
137793	A. actinomycetemcomitans 120/48-49, CIP 52.105, NCTC 9709, CCUG 3711
137823	A. actinomycetemcomitans B5279, CIP 101032, ATCC 29522, NCTC 10979, ...
137824	A. actinomycetemcomitans A1916, CIP 101033, ATCC 29523, JCM 12985, ...
137850	A. actinomycetemcomitans 457-85, 31054, CIP 101673
137869	A. actinomycetemcomitans NIBBI 7934, 955-85, CIP 102003
137882	A. actinomycetemcomitans CIP 52.109
137897	A. actinomycetemcomitans 63.86, CIP 102138
137967	A. actinomycetemcomitans 279-86, CIP 102329
137995	A. actinomycetemcomitans 430-86, CIP 102432
137999	A. actinomycetemcomitans 440-86, CIP 102437
138063	A. actinomycetemcomitans 622-86, CIP 102628
138592	A. actinomycetemcomitans CIP 101478
138701	A. actinomycetemcomitans 163.86, CIP 102207
138937	A. actinomycetemcomitans Kyritsopoulos, CIP 68.43
139434	A. actinomycetemcomitans 739.84, CIP 101107
139675	A. actinomycetemcomitans 283-86, CIP 102323
141371	A. actinomycetemcomitans CCUG 1210
142454	A. actinomycetemcomitans CCUG 12604
144398	A. actinomycetemcomitans CCUG 24857
144399	A. actinomycetemcomitans CCUG 24858
144400	A. actinomycetemcomitans CCUG 24859
144864	A. actinomycetemcomitans CCUG 26903
145665	A. actinomycetemcomitans CCUG 29180
145828	A. actinomycetemcomitans CCUG 29730
145848	A. actinomycetemcomitans CCUG 29772
145978	A. actinomycetemcomitans CCUG 30070
146232	A. actinomycetemcomitans CCUG 30676
146235	A. actinomycetemcomitans CCUG 30681
146759	A. actinomycetemcomitans CCUG 32074
147962	A. actinomycetemcomitans CCUG 34586
148215	A. actinomycetemcomitans CCUG 35054
148720	A. actinomycetemcomitans CCUG 35851
148741	A. actinomycetemcomitans CCUG 35886
148975	A. actinomycetemcomitans CCUG 36666
149178	A. actinomycetemcomitans CCUG 37000
149279	A. actinomycetemcomitans CCUG 37399
149285	A. actinomycetemcomitans CCUG 37418
149857	A. actinomycetemcomitans CCUG 38565
149865	A. actinomycetemcomitans CCUG 38577
150647	A. actinomycetemcomitans CCUG 41853
150659	A. actinomycetemcomitans CCUG 41889
151099	A. actinomycetemcomitans CCUG 43274
151113	A. actinomycetemcomitans CCUG 43298
151795	A. actinomycetemcomitans CCUG 44891
152004	A. actinomycetemcomitans CCUG 45503
152464	A. actinomycetemcomitans CCUG 46863
153109	A. actinomycetemcomitans CCUG 48512
153410	A. actinomycetemcomitans CCUG 49496
153923	A. actinomycetemcomitans CCUG 51667
153925	A. actinomycetemcomitans CCUG 51669
153926	A. actinomycetemcomitans CCUG 51670
153927	A. actinomycetemcomitans CCUG 51671
153928	A. actinomycetemcomitans CCUG 51672
153929	A. actinomycetemcomitans CCUG 51673
155035	A. actinomycetemcomitans CCUG 56172
155036	A. actinomycetemcomitans CCUG 56173
155609	A. actinomycetemcomitans CCUG 58363
156322	A. actinomycetemcomitans CCUG 61155
163782	A. actinomycetemcomitans JCM 30399
165825	A. actinomycetemcomitans JCM 8577, ATCC 43719
165826	A. actinomycetemcomitans JCM 8579, ATCC 43717

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	97.8
125438		90.488
125438	negative	97.582

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
59274	positive	growth	37	mesophilic

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		98.9
125438		92.602

Oxygen tolerance

59274

Oxygen tolerancemicroaerophile

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Human
#Host Body-Site	#Oral cavity and airways
#Host Body Product	#Oral cavity and Airways

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
59274	Human dental plaque	Finland	FIN	Europe

Safety information

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Aggregatibacter actinomycetemcomitans partial 16S rRNA gene, strain HG3907/HK929/CCUG 51668, serovar E	FN547979	1199		714

Genome sequences

@ref	Description	Accession	Assembly level	Database	NCBI tax ID
66792	Aggregatibacter actinomycetemcomitans strain HK_929	714.286	wgs	PATRIC	714

Genome-based predictions

Predictions

Predictions from Diaspora project based on:
Aggregatibacter actinomycetemcomitans strain HK_929
PATRIC: 714.286

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.90	no
125439	motility	BacteriaNetⓘ	no	75.10	no
125439	gram_stain	BacteriaNetⓘ	negative	97.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	79.70	no

Predictions from Diaspora project based on:
Aggregatibacter actinomycetemcomitans strain HK_929
PATRIC: 714.286

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.58	no
125438	anaerobic	anaerobicⓘ	no	93.65	no
125438	aerobic	aerobicⓘ	no	86.32	yes
125438	spore-forming	spore-formingⓘ	no	92.60	no
125438	thermophilic	thermophileⓘ	no	97.50	yes
125438	flagellated	motile2+ⓘ	no	90.49	no

External links

Straininfo Link

@ref	Straininfo	Culture collections
107650	303003	CCUG 51668

Culture collection no.

	Culture collection no.CCUG 51668
	Linkhttps://www.ccug.se/strain?id=51668

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#59274	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 51668
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#107650	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID303003.1 )
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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