Cite this strain

(JCM 17087)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161925

Type strain

Culture col. no. JCM 17087

NCBI tax ID(s) 1411316

Special Collections JCM

Name and taxonomic classification

JCM 17087 is a mesophilic bacterium that was isolated from Soil.

mesophilic 16S sequence Bacteria

Culture Collection Numbers

JCM 17087

Last LPSN update 2024-12-09 10:52:28

Domain Bacteria

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Pedobacter

Full scientific name Pedobacter Steyn et al. 1998

Synonyms (1)

Paradesertivirga

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Soil	Daejeon	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence HM204916 (>99% sequence identity) for Pedobacter from Microbeatlas

Aquatic Samples	130
Soil Samples	446
Animal Samples	733
Plant Samples	169
Total Samples	1478

Safety information

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Pedobacter sp. PBI 90 16S ribosomal RNA gene, partial sequence	HM204916	1470		862133

Genome-based predictions

External links

Culture collection no.

	Culture collection no.JCM 17087
	Linkhttp://www.jcm.riken.jp/cgi-bin/jcm/jcm_number?JCM=17087

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

Rate our new design

Content

About us