Cite this strain

(JCM 19032)

BacDive ID 162368

Type strain

Culture col. no. JCM 19032

NCBI tax ID(s) 1460633

Special Collections JCM

Links

JCM 19032 is a bacterium of the family Halomonadaceae.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 131690

JCM 19032

@ref 20215

Last LPSN update 2026-05-29 08:44:55

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Halomonadaceae

Genus Halomonas

Full scientific name Halomonas Vreeland et al. 1980

Synonyms (8)

Volcaniella
Franzmannia
Onishia
Billgrantia
Vreelandella
Deleya
Litchfieldella
Bisbaumannia

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	93.559
125438	negative	100

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		91.444
125439		99.84

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM131035v1 assembly for Halomonas sp. JCM 19032	contig	GCA_001310355	1460633.3	2675903421	1460633	0

Genome browser: GCA_001310355

Genome-based predictions

Predictions

Predictions from Diaspora project based on:
ASM131035v1 assembly for Halomonas sp. JCM 19032
PATRIC: 1460633.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	93.56	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	87.44	no
125439	motility	BacteriaNetⓘ	yes	76.97	no
125439	spore_formation	BacteriaNetⓘ	no	99.84	no

Predictions from Diaspora project based on:
Halomonas sp. JCM 19032
PATRIC: 1460633.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	95.77	no
125438	spore-forming	spore-formingⓘ	no	91.44	no
125438	aerobic	aerobicⓘ	yes	82.90	no
125438	thermophilic	thermophileⓘ	no	97.00	no
125438	flagellated	motile2+ⓘ	yes	78.53	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us