Cite this strain

(JCM 31817)

BacDive ID 164130

Type strain

Culture col. no. JCM 31817

NCBI tax ID(s) 35749

Special Collections JCM

Links

JCM 31817 is an archaeon of the family Thermococcaceae.

genome sequence Archaea

Name and taxonomic classification

SI-ID 131287

JCM 31817

@ref 20215

Last LPSN update 2026-05-29 08:45:20

Domain Archaea

Phylum Methanobacteriota

Class Thermococci

Order Thermococcales

Family Thermococcaceae

Genus Thermococcus

Full scientific name Thermococcus Zillig 1983

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	85

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate anaerobe	99.631

Spore formation

@ref	Spore formation	Confidence
125439		99.614

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM219718v1 assembly for Thermococcus sp. 5-4	complete	GCA_002197185	2008440.3	2758568028	2008440	98.99

Genome browser: GCA_002197185

Genome-based predictions

Predictions

Predictions from Diaspora project based on:
ASM219718v1 assembly for Thermococcus sp. 5-4
PATRIC: GCA_002197185

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	99.63	no
125439	motility	BacteriaNetⓘ	no	61.16	no
125439	gram_stain	BacteriaNetⓘ	positive	51.92	no
125439	spore_formation	BacteriaNetⓘ	no	99.61	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us