Cetobacterium ceti NCFB 3026 is an animal pathogen of the family Fusobacteriaceae.
animal pathogen genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Fusobacteriati |
| Phylum Fusobacteriota |
| Class Fusobacteriia |
| Order Fusobacteriales |
| Family Fusobacteriaceae |
| Genus Cetobacterium |
| Species Cetobacterium ceti |
| Full scientific name Cetobacterium ceti Foster et al. 1996 |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | anaerobe | 99.9 |
| @ref | Pathogenicity animal | Biosafety level | Biosafety level comment | |
|---|---|---|---|---|
| 20215 | 2 | Risk group |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | IMG-taxon 2585428148 annotated assembly for Cetobacterium ceti ATCC 700028 | scaffold | 180163 | 65.52 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20215 | Cetobacterium ceti 16S rRNA gene, strain M-3333; NCFB 3026 | X78419 | 1503 | 180163 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 74.40 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 77.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 67.50 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 99.90 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 85.27 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 88.33 | no |
| 125438 | aerobic | aerobicⓘ | no | 95.57 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 72.23 | no |
| 125438 | thermophilic | thermophileⓘ | no | 91.32 | no |
| 125438 | flagellated | motile2+ⓘ | no | 78.31 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Unveiling the Probiotic Potential of the Anaerobic Bacterium Cetobacterium sp. nov. C33 for Enhancing Nile Tilapia (Oreochromis niloticus) Cultures. | Colorado Gomez MA, Melo-Bolivar JF, Ruiz Pardo RY, Rodriguez JA, Villamil LM. | Microorganisms | 10.3390/microorganisms11122922 | 2023 | |
| Phylogeny | Cetobacterium ceti gen. nov., sp. nov., a new gram-negative obligate anaerobe from sea mammals. | Foster G, Ross HM, Naylor RD, Collins MD, Ramos CP, Fernandez Garayzabal F, Reid RJ | Lett Appl Microbiol | 10.1111/j.1472-765x.1995.tb01041.x | 1995 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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