Cite this strain

Mucilaginibacter achroorhodeus (KACC 19906, MJ1a, NBRC 113667)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 170218

Type strain

Strain Designation MJ1a

Culture col. no. KACC 19906 MJ1a NBRC 113667

NCBI tax ID(s) 2599294

Links

Name and taxonomic classification

Mucilaginibacter achroorhodeus MJ1a is a Gram-negative bacterium of the family Sphingobacteriaceae.

Gram-negative genome sequence 16S sequence Bacteria

Culture Collection Numbers

KACC 19906 MJ1a NBRC 113667

Last LPSN update 2024-12-09 10:53:24

Domain Bacteria

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Mucilaginibacter

Species Mucilaginibacter achroorhodeus

Full scientific name Mucilaginibacter achroorhodeus Kim et al. 2022

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	96.31
125439	negative	96.6

Culture and growth conditions

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		97.7

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	93.7

Isolation, sampling and environmental information

Safety information

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20215	Mucilaginibacter achroorhodeus strain MJ1a 16S ribosomal RNA gene, partial sequence	MH107818	1464		2599294

Genome sequences

@ref	Description	Accession	Assembly level	Database	NCBI tax ID
66792	Mucilaginibacter achroorhodeus MJ1a	GCA_007846095	contig		2599294

Genome-based predictions

Predictions

Predictions from Diaspora project based on:
Mucilaginibacter achroorhodeus MJ1a
NCBI: GCA_007846095

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	97.70	no
125439	motility	BacteriaNetⓘ	no	70.90	no
125439	gram_stain	BacteriaNetⓘ	negative	96.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.70	no

Predictions from Diaspora project based on:
Mucilaginibacter achroorhodeus MJ1a
NCBI: GCA_007846095.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.31	no
125438	anaerobic	anaerobicⓘ	no	97.26	no
125438	aerobic	aerobicⓘ	yes	86.65	no
125438	spore-forming	spore-formingⓘ	no	85.94	no
125438	thermophilic	thermophileⓘ	no	96.49	no
125438	flagellated	motile2+ⓘ	no	88.50	no

External links

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Identification of Mucilaginibacter conchicola sp. nov., Mucilaginibacter achroorhodeus sp. nov. and Mucilaginibacter pallidiroseus sp. nov. and emended description of the genus Mucilaginibacter.	Kim J, Lee B, Chhetri G, Kim I, So Y, Jang W, Seo T	Int J Syst Evol Microbiol	10.1099/ijsem.0.005431	2022

Culture collection no.

Culture collection no.
KACC 19906
MJ1a
NBRC 113667

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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